Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva03g01301 | ATGGCTTCCGATCTCGAAGAGAAAGCCAAAGGGGCCTTCATCGACGAGAACTACGAGCTCGCCGTCGAATTGCTCAGTCAAGCTATTGATCTCAACCCTAGGAGCGCCGAGCTCTTTTCCGACCGTGCCCAAGTCAACATCAAGCTCAACAACTTCACTGAGGCTGTTGCCGATGCAAACAGGGCAATTGAGTTGAATCCTAAGCTATCAAAAGCATATTATCGCAAAGGCCTTGCATGCATAAAGCTTGAGGAATATCAAACTGCTAAAACTGCTTTTGAGTCAGGTGCTTCATTGGCACCAGAAGACACAAGATTCACTAATTCGATCAAAAAATGTGATGAGCTCATAGCAGAAGAGACTGGTACCATCATCACAGAGGAAAAGATCACTCCAAAGGATACATCTGTGGATAATGTTCAGCCAGTGAATGATCCTCCACAACAGGTCATAGCTGCACCCAAACCAAAATACAGGCATGAATTCTACCAGAAGCCTGATGCGGTGGTTGTGACTATATTTGCAAAGGGTGTCCAAAAGAACTGTGTTTCTGTTGAGTTTGGTGATCAAATACTAAGCGTTGTAATTGATGTCCCTGGTGAAGatgcatataattttcaaCCTCGCTTGTTTGGAAAGATAATACCTGCCGGAAGTAGATATGAAGTTTTGTCCaccaaaattgaaattcacCTTGCAAAAGCTGAGCCAATCCAATGGACATCTCTAGAATACAGCAAGGAAGGTGGAGTTCTACAAAGGGCTAATGTGTCCTCAGTTGCTGGTGGTCAAAGGCCAACTTATCCATCCTCAAAATCAACCAGAGTAGATTGGGATAAGCTTGAAGCTCAAGTTAAGAAAGAGgagaaagaagaaaaacttgaTGGTGATGCTGCTTTGAACAAATTTTTCCGGGACATTTATCAGGACGCCGATGAAGATACCAGACGAGCAATGAGAAAGTCATTTGTTGAGTCAAATGGAACAGTGCTGTCTACGAACTGGAAAGAAGTGGGATCAAAGAAGGTTGAGGGAAGTCCTCCTGATGGCATGGAGTTGAAAAAATGGGAGTATTA | 1076 | 0.4201 | MASDLEEKAKGAFIDENYELAVELLSQAIDLNPRSAELFSDRAQVNIKLNNFTEAVADANRAIELNPKLSKAYYRKGLACIKLEEYQTAKTAFESGASLAPEDTRFTNSIKKCDELIAEETGTIITEEKITPKDTSVDNVQPVNDPPQQVIAAPKPKYRHEFYQKPDAVVVTIFAKGVQKNCVSVEFGDQILSVVIDVPGEDAYNFQPRLFGKIIPAGSRYEVLSTKIEIHLAKAEPIQWTSLEYSKEGGVLQRANVSSVAGGQRPTYPSSKSTRVDWDKLEAQVKKEEKEEKLDGDAALNKFFRDIYQDADEDTRRAMRKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMELKKWEY | 358 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva03g01301 | 358 | ProSiteProfiles | SGS domain profile. | 267 | 358 | IPR007699 | - | |
Bva03g01301 | 358 | ProSiteProfiles | TPR repeat profile. | 70 | 103 | IPR019734 | GO:0005515 | |
Bva03g01301 | 358 | ProSiteProfiles | CS domain profile. | 155 | 244 | IPR007052 | - | |
Bva03g01301 | 358 | SMART | tpr_5 | 36 | 69 | IPR019734 | GO:0005515 | |
Bva03g01301 | 358 | SMART | tpr_5 | 2 | 35 | IPR019734 | GO:0005515 | |
Bva03g01301 | 358 | SMART | tpr_5 | 70 | 103 | IPR019734 | GO:0005515 | |
Bva03g01301 | 358 | PANTHER | PROTEIN SGT1 HOMOLOG | 1 | 358 | IPR044563 | GO:0051087 | |
Bva03g01301 | 358 | SUPERFAMILY | HSP20-like chaperones | 154 | 247 | IPR008978 | - | |
Bva03g01301 | 358 | SUPERFAMILY | TPR-like | 6 | 113 | IPR011990 | GO:0005515 | |
Bva03g01301 | 358 | Pfam | Tetratricopeptide repeat | 14 | 75 | - | - | |
Bva03g01301 | 358 | Gene3D | - | 151 | 253 | IPR008978 | - | |
Bva03g01301 | 358 | PANTHER | PHOSPHATASE-RELATED | 1 | 358 | - | - | |
Bva03g01301 | 358 | CDD | p23_CS_SGT1_like | 161 | 244 | - | - | |
Bva03g01301 | 358 | Gene3D | Tetratricopeptide repeat domain | 1 | 138 | IPR011990 | GO:0005515 | |
Bva03g01301 | 358 | Pfam | SGS domain | 277 | 356 | IPR007699 | - | |
Bva03g01301 | 358 | Pfam | CS domain | 159 | 234 | IPR007052 | - | |
Bva03g01301 | 358 | ProSiteProfiles | TPR repeat profile. | 36 | 69 | IPR019734 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva03g01301 | Bva-Chr3 | 12673636 | 12678294 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva03g01301 | 1 | 86 | U-box Gene Family | AT3G07370 | 30.233 | 8.96e-07 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva03g01301 | K12795 | - | twl:119981914 | 511.146 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva03g01301 | 03 | 12673636 | 12678294 | Bva04g01199 | 04 | 8183312 | 8189408 | ECH | |
Bva03g01301 | 03 | 12673636 | 12678294 | Bva03g01301 | 03 | 12673636 | 12678294 | ECH |