Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01297 ATGGCAGACCAAGACCAACCACCGTCTCCGCCACCGCCAAAAACCTACAAACTAACAGCATCTTCAATCTCCTACACTAAACCAACCACCACCAACACCCCCATTGCCCCACTTTCCCTCTTAAAACGTTGTACTTCAACCCCACCAAGCTACATCCTTAAAGATGTCTCCCTCACAGCCTACCCTTCTCAAATCCTCGCCATTGTCGGGCCGAGCGGTGCCGGAAAATCCACTCTCCTAGACATTCTGGCGGCTCGGACATCCCCCACGAGTGGCACTCTTCTTCTCAACTCTTCTCCTCTGAATCCCTCCACATTCCGGAAACTCTCTGTTTATGTCCCACAACACGATGCATGCCTTCCATTGCTCACTGTCTCTGAAACTTTCGCCTTCGCCGCTCGGCTTCTTAACCCTAAGGCATCTGACATAGCCACCATTGTTTCTTCTCTGCTTACTGACCTTAGTTTAAACCATTTGGCTAACACAAGGCTCGCCCATGGCTTATCTGGTGGAGAACGCAGAAGGGTCTCAATAGGGCTAAGTCTACTCCATGACCCTGCTGTGTTGCTTCTAGATGAACCCACTTCTGGTTTGGACAGTTCATCTTCTTTCAATGTCATgcaaatcttaaaatcaaCCTGTGTTTCTAGTCATCGGACAATTGTTCTTTCTATTCATCAGCCAAGTTTCAAGATCCTCTCTACGATTGATAGAATTTTGTTGCTATCAAAAGGGTCAGTGGTTCACCATGGAACACTTGCTTCCCTCCAATCTTGCTTGCTCTCAAGTGGGTTCACTGTCCCTCCTCAGCTCAATGCCTTGGAATATGCCATGGAGATTTTAAACCAGCTCAACGAGCTTGGACCCATTTCTTCACCGTCTCTTTCCGAGTCTCCAGAGAGTTCTAACAGTTATAGCTCTCCATGTgagaaaagaataatcaaagaGATCTTTAGATACAAAAGCTCTAGAGTCCAGGAAATCTGCACTCTCTATAGAAGGTTCTGGAAGATCATTTACAGAACCAGGCAACTTCTTTTTACCAACACAGCAGAAGCACTTCTTGTGGGTATTGTTCTTGGAACCATTTACATTAACATTGGTTTTGACAAGCAAGGGATAGAGAAGAGGTTTGGTCTCTTTGCCTTCACTCTCactttccttctctcttccaCCACTGAAACACTTCCCATCTTCATCAACGAAAGGCCAATCTTACTAAGAGAAACTTCAAGTGGGGTTTACAGGCTTTCTTCATATCTCATTGCAAACACACTTGTTTTCTTACCTTACTTGCTAGTAATTGCAGTCATATTCTCCATACCAGTCTATTTCTTAGTGGGTTTGTGTGcttcttggctttcttttgCTTACTTTGTTTTGGTCATATGGGTAATTGTTCTAATGGCAAACTCATTCGTTCTCTTCTTGAGCTCTCTTGCTCCAAATTACATCGCCGGAACTTCACTCTTAACAGTGCTTCTTGCTGcattttttctattctctgGCTATTTTATCTCTAAGGAAAGCTTACCCAGATATTGGCTTGTGATGCACTTCTTCTCTATGTACAAATATGCCCTTGACGCCCTTCTTATCAACGAGTACTCTTGCTTGGTCTCAAGGTGTTTTATTTGGTACCAAGAGAATGAGCAGTGCATGATCACTGGAGGTGATGTGTTGCAGAAGAGAGGGCTCCATGAGAGACAGAGATGGACCAACGTGTATATCTTGATTGGCTTCTTTGTCTTGTACCGTGTGCTTTGCTTGTTGGTTTTGGTTAGAAGGGTTTCAAGgtcaaaaacttg 1808 0.4237 MADQDQPPSPPPPKTYKLTASSISYTKPTTTNTPIAPLSLLKRCTSTPPSYILKDVSLTAYPSQILAIVGPSGAGKSTLLDILAARTSPTSGTLLLNSSPLNPSTFRKLSVYVPQHDACLPLLTVSETFAFAARLLNPKASDIATIVSSLLTDLSLNHLANTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSSSSFNVMQILKSTCVSSHRTIVLSIHQPSFKILSTIDRILLLSKGSVVHHGTLASLQSCLLSSGFTVPPQLNALEYAMEILNQLNELGPISSPSLSESPESSNSYSSPCEKRIIKEIFRYKSSRVQEICTLYRRFWKIIYRTRQLLFTNTAEALLVGIVLGTIYINIGFDKQGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVIAVIFSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPRYWLVMHFFSMYKYALDALLINEYSCLVSRCFIWYQENEQCMITGGDVLQKRGLHERQRWTNVYILIGFFVLYRVLCLLVLVRRVSRSKT 602
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01297 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 257 IPR027417 -
Bva03g01297 602 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524
Bva03g01297 602 Pfam ABC transporter 53 196 IPR003439 GO:0005524
Bva03g01297 602 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 597 - -
Bva03g01297 602 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 7 597 - -
Bva03g01297 602 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 269 IPR003439 GO:0005524
Bva03g01297 602 Gene3D - 38 261 IPR027417 -
Bva03g01297 602 Pfam ABC-2 type transporter 226 286 IPR043926 GO:0140359
Bva03g01297 602 Pfam ABC-2 type transporter 327 536 IPR013525 GO:0016020|GO:0140359
Bva03g01297 602 SMART AAA_5 62 246 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva03g01297 Bva-Chr3 12658584 12660640 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01297 46 256 Calmodulin-binding Proteins AT2G36910 30.769 1.75e-18 88.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01297 K05681 - qsu:112007275 871.692
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01297 03 12658584 12660640 Bva03g01297 03 12658584 12660640 ECH