Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01291 ATGCGGGTGATACAACATTTTTCACGCTGTAACCGGCTTTCATCTGGTATTTATACTGCAGGGGTTTTCGCAGCAGCTCCAATTCCGAATTGCGATTCTACTCCCTTTTCTGTCGTCTCCACTCCAATTGCCTCCGGTGTTGGAGATATGGCTTCTGGTGCTGATGATGTTACAATGGTTAACCTGGAGGGGGGAAAATCGAAGGGAAGAAAGGACAAACATGTCCAAGCTGAAGGTTCAGGATGTTGGATGAAATTCAAGTTTATGGGAAAGTGTATGCCTTTGAGGAGTGGCAAGAGTGGGCAAGATGAAAGCAAATATACAAATGATACCAGTAGAGGCCAACCAGTTGCTCCAGTTGGAACATCTTCAACCAACATCAATGCCATAACTGGTGCATCTGCTcacaataaaattgatgaactaAAGATTGCATCCAATCTCCGAAGGTTCTCCTTTCATGAACTTAAGTTGGTGACAAGGAATTTTAGACCTGAATATATGCTAGGTGAGGGTGGATTTGGTAGGGTATTCAAAGGTTGGATCAGTGAAAGGGGAAAATGTCCAGCAAGACCTGGCACAGGGATACCTGTTGCAGTAAAGACTCTCAACCATGAAGGACTTCAAGGCCATAAAGAATGGCTAGCTGAAGTTATTTATCTTGGTGAACTCCATCATGAAAATCTAGTTAGATTGATAGGTCACTGCATTGAGGGCAAGCAAAGGCTTCTAGTATATGAGTTTATGCCTCGAGGAAGCTTGGAGCATCACCTGTTTAAGAGAACTCAGATCCTTGCATGGCCTAtcagaatgaaaattttgcttgGTGCTGCAAAGGGCCTTGCATTTCTGCACGAGGAAATCGCAAGGCCAGTGATATTTCGAGACTTCAAAACATCAAATATCCTGTTGGATGCAGATTACAATGCAAAACTTTCTGATTTTGGTCTTGCCAAAGATGGTCCGGAGGGAGACTCCACTCATGTCTCTACTCGAGTTATGGGGACACAGGGTTATGCAGCGCCTGAGTATGTGATGACAGGACATCTCAGTCCTAAGAGTGATGTCTATAGTTTCGGGGTTGTCCTCCTTGAAATGTTGACTGGAAGAAAATCCATTGACAGAAGCCGGCCACCTGGGGAGCATAACCTGACAGATTGGGCACGGTCGCGTCTTATGGACAGAAAACGGTTCTATCAACTGATTGATCCTCGGCTTGATGGTAATTTCTCCATCAAAGGTGCTTGGAAAGCTTGTGTGGTGGCTGCTCGCTGCCTTCAACATAACCCAAAAGCAAGGCCTCGGATGAGCGAAGTTGTTTCAGCTCTAACCTCATTGCTTGAGCTCAATGACATGGCTTCTGCTTCACCCTCCTTCCAAGTTATGCAAAATTCTAGAAATGCCCAAAGAACGCAGTCTGGAATCTCAAGAACACCTTCAAGGAGTCCAAATGGCATGCAAGCCACACCATCAAGAAGTCCAAATGCCATGCAAGCCTCGCCATTATGGAGTCCAAATGTCATGCAGGTCTCACCATGGCGCTTTAACCATTCTCCATTATGCTCACCCAGTCCTTGTGGTGGAAACCATTG 1592 0.446 MRVIQHFSRCNRLSSGIYTAGVFAAAPIPNCDSTPFSVVSTPIASGVGDMASGADDVTMVNLEGGKSKGRKDKHVQAEGSGCWMKFKFMGKCMPLRSGKSGQDESKYTNDTSRGQPVAPVGTSSTNINAITGASAHNKIDELKIASNLRRFSFHELKLVTRNFRPEYMLGEGGFGRVFKGWISERGKCPARPGTGIPVAVKTLNHEGLQGHKEWLAEVIYLGELHHENLVRLIGHCIEGKQRLLVYEFMPRGSLEHHLFKRTQILAWPIRMKILLGAAKGLAFLHEEIARPVIFRDFKTSNILLDADYNAKLSDFGLAKDGPEGDSTHVSTRVMGTQGYAAPEYVMTGHLSPKSDVYSFGVVLLEMLTGRKSIDRSRPPGEHNLTDWARSRLMDRKRFYQLIDPRLDGNFSIKGAWKACVVAARCLQHNPKARPRMSEVVSALTSLLELNDMASASPSFQVMQNSRNAQRTQSGISRTPSRSPNGMQATPSRSPNAMQASPLWSPNVMQVSPWRFNHSPLCSPSPCGGNH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01291 530 PANTHER OS01G0588500 PROTEIN-RELATED 104 501 - -
Bva03g01291 530 Gene3D Phosphorylase Kinase; domain 1 136 248 - -
Bva03g01291 530 MobiDBLite consensus disorder prediction 461 500 - -
Bva03g01291 530 MobiDBLite consensus disorder prediction 101 124 - -
Bva03g01291 530 ProSiteProfiles Protein kinase domain profile. 163 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01291 530 ProSitePatterns Protein kinases ATP-binding region signature. 169 201 IPR017441 GO:0005524
Bva03g01291 530 SUPERFAMILY Protein kinase-like (PK-like) 141 443 IPR011009 -
Bva03g01291 530 CDD STKc_IRAK 169 446 - -
Bva03g01291 530 MobiDBLite consensus disorder prediction 97 124 - -
Bva03g01291 530 PANTHER TYROSINE KINASE FAMILY PROTEIN 104 501 - -
Bva03g01291 530 Pfam Protein tyrosine and serine/threonine kinase 168 443 IPR001245 GO:0004672|GO:0006468
Bva03g01291 530 Gene3D Transferase(Phosphotransferase) domain 1 249 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01291 Bva-Chr3 12587394 12592641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01291 82 459 Glycoside Hydrolase AT3G07070 48.564 2.13e-110 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva03g01291 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01291 - - ming:122086422 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01291 03 12587394 12592641 Bva06g01243 06 9566634 9569058 ECH
Bva03g01291 03 12587394 12592641 Bva05g00458 05 2259026 2261625 ECH
Bva03g01291 03 12587394 12592641 Bva03g01291 03 12587394 12592641 ECH
Bva03g01291 03 12587394 12592641 Bva04g01205 04 8260389 8266771 ECH
Bva08g01457 08 7643106 7646247 Bva03g01291 03 12587394 12592641 ECH