Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01287 ATGGGTTATCTGAATAGAGCTTCAAAGAGCATAAGGCAATCAAATTACTTATCACTGTTGTACAATAGCTTCTCAGTTTCCCCAATCTCCCTAGTTTCCCCTATATTGGGAAGCAATTTCATAAACAATAGACTAATCCATCAGAGATTTGCTCTGAGCCGTGCACTATTCTGCTCTCAATCCCGCCAAAACAGCAAAGAAAATAGTCGCATAGATTTGACCCGTTATCCTCCTGAACTAATCAGAAACTTCTCAATCATTGCACATGTAGATCATGGCAAGTCTACTCTTGCTGATCGGCTTCTGGAGCTCACTGGGACCATTAAGAAAGGGCATGGTCAGCCTCAGTATCTTGATAAGTTACAGgtagagagagaaaggggaaTTACAGTTAAAGCCCAAACAGCAACAATGTTCTATAAGCATAGTCTGCTGGGGGGCAACAATGATGATGTTCATGAACCACCTAACTTCTTGCTGAATCTTATTGACACGCCTGGGCATGTGGATTTTAGTTATGAAGTATCAAGGTCATTGGCGGCTTGTCAGGGTGCACTTTTGGTTGTTGATGCAGCTCAAGGAGTCCAAGCACAAACCGTTGCTAACTTCTATCTCGCTTTTGAGTCTAACCTGGCAATTATACCTGTCATAAACAAGATAGACCAGCCAACTGCTGATCCTGATCGTGTGAAAGCTCAACTAAAGTCAATGTTTGATCTTGACCCAAGTGATGCACTGTTAACCTCTGCTAAAACAGGGCAGGGTCTTGAGCAAGTTCTTCCTGCAGTTATAGAGCGCATACCTCCTCCTCCTGGGAAGAGCAGTTCTCCGCTGCGCATGCTTTTGCTGGATTCATATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTGTTGTTGATGGTGCCTTGCGCAAAGGGGATAAGATTTCATCTGCAGCAACTGGGCAATCTTATGAAGCTCTGGATGTGGGTATCATGAATCCCGAGTTCAAACCTACTGGAACCTTGCTTACTGGACAAGTGGGCTATGTTGTAAGTGGCATGCGCTCAACCAAAGAGGCACGTGTTGGAGATACCCTCTACCATACTCGAAGCACTGTAGAGGCCCTTCCAGGTTTCAAGCCAGCCAAACACATGGTATTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCACTCAACCATGCAATAGAGAGGCTTACATGCAATGATGCTAGTGTCTCTATTACCAAAGAGAGTAGTACAGCACTTGGTCTAGGTTTCAGGTGTGGTTTCTTAGGCTTACTACACATGGATGTTTTCCATCAACGGCTCGAACAGGAATACGGAGCTCACGTTATTTCAACTATCCCTACTGTGCCTTACatatttgagtattctgacgGAAGaaaGTTAGAAGTCCAGAATCCTGCTGCATTACCCTCTAATCCAAAACAGCGAGTGACAGCCAGTTGGGAACCTACAGTAATAGCCACTATTATCATTCCTAGTGAATATGTAGGGTCTGTTATTACACTTTGCTCTGAGCGAAGGGGACAGCAGTTGGAGTATTCATTTATTGACAGTCAACGGGCATTCATGAAGTACCGCATGCCTCTAAGAGAAATTGTGGTTGACTTTTATAATGAATTGAAGAGTATAACTTCAGGCTATGCTTCATTTGATTACGAGGATGCAGATTATCAAAATTCCGATCTGGTGAAACTTGATATTCTCTTGAACGGACAACCAGTTGATGCAATGGCAACCATCGTTCATAACTTGAAAGCACAACGTGTTGGACGTGAACTGGtggagaaattgaaaaaatttatagacaGGCAAATGTTCGAGATAACCATACAAGCTGCAATTGGGTCCAACATTATAGCAAGGGAAACGATTTCGGCCATGAGGAAAAATGTTCTTGCCAAGTGTTATGGTGGCGACGTCACTCGAAAGAGGAAGTTATTGGAGAAGcaaaaggaaggaaagaagCGAATGAAACGTGTGGGTTCTGTTGATATACCGCAGGAAGCGTTTCATGAGCTATTGAAGGTTTCATA 2054 0.4182 MGYLNRASKSIRQSNYLSLLYNSFSVSPISLVSPILGSNFINNRLIHQRFALSRALFCSQSRQNSKENSRIDLTRYPPELIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSLLGGNNDDVHEPPNFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLAIIPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERIPPPPGKSSSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISSAATGQSYEALDVGIMNPEFKPTGTLLTGQVGYVVSGMRSTKEARVGDTLYHTRSTVEALPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKESSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTIPTVPYIFEYSDGRKLEVQNPAALPSNPKQRVTASWEPTVIATIIIPSEYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRMPLREIVVDFYNELKSITSGYASFDYEDADYQNSDLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVEKLKKFIDRQMFEITIQAAIGSNIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01287 684 PANTHER TRANSLATION FACTOR GUF1-RELATED 67 682 IPR006297 GO:0005525
Bva03g01287 684 CDD LepA 82 267 - -
Bva03g01287 684 CDD EF4_II 278 363 - -
Bva03g01287 684 Gene3D - 454 567 - -
Bva03g01287 684 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 79 271 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 SUPERFAMILY EF-G C-terminal domain-like 488 582 IPR035647 -
Bva03g01287 684 Gene3D - 79 272 IPR027417 -
Bva03g01287 684 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 119 134 IPR031157 -
Bva03g01287 684 CDD EF4_III 379 454 - -
Bva03g01287 684 CDD lepA_C 489 568 IPR035654 -
Bva03g01287 684 Gene3D Elongation Factor G (Translational Gtpase), domain 3 372 453 - -
Bva03g01287 684 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 67 682 - -
Bva03g01287 684 Gene3D - 568 642 IPR038363 -
Bva03g01287 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 292 IPR027417 -
Bva03g01287 684 Pfam Elongation factor Tu GTP binding domain 81 268 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 Gene3D Translation factors 273 371 - -
Bva03g01287 684 PRINTS GTP-binding elongation factor signature 126 134 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 PRINTS GTP-binding elongation factor signature 213 222 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 PRINTS GTP-binding elongation factor signature 83 96 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Bva03g01287 684 SUPERFAMILY EF-G C-terminal domain-like 380 457 IPR035647 -
Bva03g01287 684 TIGRFAM small_GTP: small GTP-binding protein domain 84 259 IPR005225 GO:0005525
Bva03g01287 684 TIGRFAM lepA: elongation factor 4 80 683 IPR006297 GO:0005525
Bva03g01287 684 Hamap Elongation factor 4 [lepA]. 74 684 IPR006297 GO:0005525
Bva03g01287 684 Pfam Elongation factor G C-terminus 489 574 IPR000640 -
Bva03g01287 684 Pfam GTP-binding protein LepA C-terminus 576 682 IPR013842 -
Bva03g01287 684 SUPERFAMILY Translation proteins 269 366 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01287 Bva-Chr3 12541400 12546704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01287 81 222 Eukaryotic Initiation Factors Gene Family AT1G56070 40.268 2.95e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01287 K21594 - zju:107415559 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01287 03 12541400 12546704 Bva03g01287 03 12541400 12546704 ECH