Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01286 ATGTCCAAAATCGCTGCTAATCCTTCTGGTGCAGtgatggaagagaagaaagatgcAGCTTCTATTTCCCATCATGAAGAGGGTTTCTGTGTTCAAGAGGTTGGAAAGgATGATGGACTCAAATCAGCCATAGCTGAGATGGGTGAGGTGAAAGAAGAGAACGAGAGGTTGAAGATGATGCTAGAGCGAGTTGAAAAGGATTACCAGTCTCTGCAACTGCGTTTCTTTGATATCCTTCAGAAAGAAGCTTCAGAAAAAGGCAGTGCAGAAGGTTCAGTAACTTCCCTAGATGAAACTGAAGAGCCTGAGATGGTATCACTTCGCCTTGGAAGAAATCCAAGGGAGCCtaagaaagatgaaagaaatggGACCTGtaacaaagcaaaagaaaatgaagattttgaGTTAGCTAGCAACTGCCTCACACTTGGATTAGATGCCACGTGTCAGTTGTCAATGGAGTTGGCGTCTGAGAGCTCAGAAGAGCCAAAGGAAACAGAAGCTGGAGGAGAAACATGGCCAACTAGTAAATCAGTAAAGGCAAGAAATGGAGATGATGAAATTTCAGACCAAATGCCCACCAAGAGAGCTAGGGTTTCTGTAAGAGCAAGATGTGACACTCCCACgATGAATGATGGATGCCAATGGAGGAAATACGGACAGAAAATAGCAAAAGGGAATCCATCATGCCCACGAGCATACTACCGATGCACAGTTGCACCAGCATGCCCAGTAAGGAAACAGGTGCAAAGATGCGCAGAAGACATGTCCATCTTAATCACCACCTATGAAGGAACACACAACCACCCACTTCCAGTTTCAGCCACCGCCATGGCTTCCACCACTTCTGCTGCTGCCTCCATGCTCTTATCAGATTCTTCAACATCTCAGCCTTCAACTCACAGTTCTGCTCTTTCTGGAACTGTTTTCAACGGTCTAAGCTTCAGTCATTTTGATCAATCAAGAGCCAAACAGGGCTTATTTCCCAACCATGCAGCCTCGCCATTGTTCCCAACAATCACTCTAGACCTTACTTCTGCATCATCCTCTTCACCAGCTCATGTCACTCGTTTACCTTCTAACATTGCTTCAGGCCCAAGGTATCCCCCAACAAATCTAAGCTTTTGTTCAAAGGAGCCCACAATTATACCTGCTGTGTGGGGTAATGGGTTCCCTAATAATGGCACATTGGCTATGGACAAACCCCCCATGAGGTCACTTAACCTGGGAAATCAGTTTCAAGAACATTTCTATCAGCAGTACATGAAGAATCAAGCTCCTTCACGAGATGCTTTGGCAAAAACACTAACCAAAGTAATCAGCACCGACCCGAGTCTTCGATCGGTGATTGCCGCTGCAGTAACATCTGTAATGGGACAAGGATCAAGCAACAGGAACCATGGAGGAGAGGTTTCAGGTCCAGGTTTGAGCTTGAGCCTGGGAAATCAGCATGCTGCAATTGCTTCTAAAGCCAATCCAATGATCCAGAATGGGAAAGGAATGTTGCCAGGATACTTCAACTGGTTGTCGTCTTCGAGTTCACCGAATGGAGGTTTGATGCTTCAATCTCCATTGCCATTTTCTGTGTCTAAGAGTAGCACAGCTCCATCCATTATTGATCAGATCAACCATTA 1634 0.4382 MSKIAANPSGAVMEEKKDAASISHHEEGFCVQEVGKDDGLKSAIAEMGEVKEENERLKMMLERVEKDYQSLQLRFFDILQKEASEKGSAEGSVTSLDETEEPEMVSLRLGRNPREPKKDERNGTCNKAKENEDFELASNCLTLGLDATCQLSMELASESSEEPKETEAGGETWPTSKSVKARNGDDEISDQMPTKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPSCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSDSSTSQPSTHSSALSGTVFNGLSFSHFDQSRAKQGLFPNHAASPLFPTITLDLTSASSSSPAHVTRLPSNIASGPRYPPTNLSFCSKEPTIIPAVWGNGFPNNGTLAMDKPPMRSLNLGNQFQEHFYQQYMKNQAPSRDALAKTLTKVISTDPSLRSVIAAAVTSVMGQGSSNRNHGGEVSGPGLSLSLGNQHAAIASKANPMIQNGKGMLPGYFNWLSSSSSPNGGLMLQSPLPFSVSKSSTAPSIIDQINH 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01286 544 MobiDBLite consensus disorder prediction 1 25 - -
Bva03g01286 544 Gene3D WRKY domain 195 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g01286 544 MobiDBLite consensus disorder prediction 86 126 - -
Bva03g01286 544 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 34 537 - -
Bva03g01286 544 SMART WRKY_cls 210 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g01286 544 MobiDBLite consensus disorder prediction 156 200 - -
Bva03g01286 544 MobiDBLite consensus disorder prediction 101 126 - -
Bva03g01286 544 MobiDBLite consensus disorder prediction 180 200 - -
Bva03g01286 544 Pfam WRKY DNA -binding domain 211 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g01286 544 Coils Coil 40 74 - -
Bva03g01286 544 ProSiteProfiles WRKY domain profile. 205 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva03g01286 544 SUPERFAMILY WRKY DNA-binding domain 203 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva03g01286 544 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 537 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01286 Bva-Chr3 12537111 12540217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01286 47 509 WRKY Transcription Factor Family AT5G15130 43.141 2.16e-90 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva03g01286 WRKY 6.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01286 - - lang:109353541 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01286 03 12537111 12540217 Bva06g01250 06 9605082 9608711 ECH
Bva03g01286 03 12537111 12540217 Bva05g00452 05 2234077 2237079 ECH
Bva03g01286 03 12537111 12540217 Bva03g01286 03 12537111 12540217 ECH
Bva08g01450 08 7591589 7595149 Bva03g01286 03 12537111 12540217 ECH