Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01283 ATGTACGGCTTCGAAGCGCTTACATTCAACATTCATGGTGGTTACCTAGAGGCGATCGTGCGGGGTCACCGAGCTGGTTTGCTCACTGCAGCCGATTACAACAATTTGTGCCAATGTGAAACCCTGGACGATATCAAGATGCACCTTTCCGCCACCGAGTATGGCCCTTATCTACAAAATGAGCCCTCTCCATTGCATACAACTACAATTGTGGAAAAGTGTACTCTTAAACTGGTTGATGATTATAAGCACATGTTGTGCCAGGCCACAGAGCCCTTGTCAACCTTTTTGGAGTATATCACATATGGACACATGATAGACAATGTCGTTTTGATTGTTACTGGCACCCTGCACGAGAGAGATGTTCAAGAGCTCTTGGAAAAATGTCATCCTTTGGGCATGTTTGATAGCATTGCTACTCTTGCAGTTGCTCAGAATATGCGGGAACTTTACCGGTTGGTACTTGTTGACACTCCTCTGGCTCCATATTTTTCTGAGTGTATTACATCAGAGGACTTGGATGACATGAACATTGAAATCATGAGGAACACTCTTTACAAGGCATACCTTGAAGACTTTTACAAATTTTGCCAGAAACTTGGTGGTGCCACTGCTGAGATCATGTCGGACCTTCTTGCTTTCGAGGCTGATAGAAGGGCTGTGAATATTACTATCAATAGCATAGGTACTGAGCTCACCAGAGACGATCGCAGGAAATTATACTCTAATTTTGGTCTACTTTATCCCTACGGCCATGAGGAACTTGCTGTCTGTGAGGACATTGATCAGGTTCGTTCTGCTATGGAAAAATATCCCCCTTATCACTCAATTTTTGCTAAGCTATCATATGGAGAGAGTCAAATGCTTGACAAGGCATTCTACGAGGAGGAGGTGAAGAGGCTTTGCTTGGCATTTGAGCAACAGTTCCATTATGCAGTTTTTTTCGCATATATGAGGTTAAGGGAGCAGGAGATCAGGAACCTGATGTGGATTTCAGAATGTGTGGCACAGAATCAGAAGTCCAGAGTTCATGACAGTGTTGTCTTCACCTTTTA 1055 0.437 MYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRSAMEKYPPYHSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFTF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01283 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Bva03g01283 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Bva03g01283 351 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 351 - -
Bva03g01283 351 Gene3D - 91 195 IPR035067 -
Bva03g01283 351 Gene3D - 206 309 IPR035067 -
Bva03g01283 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Bva03g01283 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Bva03g01283 351 SUPERFAMILY V-type ATP synthase subunit C 14 348 IPR036079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01283 Bva-Chr3 12503565 12510192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01283 1 351 Primary Pumps ATPases(2) AT3G28710 94.017 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01283 K02146 - pvy:116145981 704.131