Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01279 atgatgatgataaagaaagaagagagcaTGGAAAGAAACCAGATGTTCATGGCAGAAGGTGAGTCCCAAGGGACTCGGTGTGGTGTCAAGAGGCGGCGAAGAGAATCTGCTGCACCTGCACTTGATGGTGAAGACAACCAAAGTCgcaagcagcagcagcagcaacagcaacaAGTTGATCAAAATTCTGCTACCAGCACTGTGAAGAGAAGTTCAAGATTTCGCGGTGTGAGCAGACATAGATGGACAGGGCGTTTTGAAGCTCATTTGTGGGACAAGCTTTCTTGGAATGTGACACAGAAGAAGAAGGGGAAgcaaggtatatatatata 332 0.3735 MMMIKKEESMERNQMFMAEGESQGTRCGVKRRRRESAAPALDGEDNQSRKQQQQQQQQVDQNSATSTVKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGIYI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01279 110 ProSiteProfiles AP2/ERF domain profile. 73 110 IPR001471 GO:0003700|GO:0006355
Bva03g01279 110 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 4 109 - -
Bva03g01279 110 Gene3D AP2/ERF domain 72 109 IPR036955 GO:0003700|GO:0006355
Bva03g01279 110 MobiDBLite consensus disorder prediction 1 79 - -
Bva03g01279 110 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 109 - -
Bva03g01279 110 MobiDBLite consensus disorder prediction 25 40 - -
Bva03g01279 110 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01279 Bva-Chr3 12488338 12489006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01279 56 110 AP2-EREBP Transcription Factor Family AT2G41710 54.545 6.67e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01279 - - aip:107621890 139.043