Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01274 ATGGGATTTGGGAATGATGCTATTCAAGCAGGGAGTTTGGGTGTGGGCAAGTCAAAGGGAAGGGAGAAGAAAGATGGTGCAGAGAAAAAAAGTGGGTGTTGGGCTAAATTCAATTGCATCAGATGCTGCATACCTTCAACATCACAGGTTGAGAATTCCTTAAGTGGTACTAGTGCCAATTACGTGGAAAACAAATCTACATGCGAGAAAAGCAAAGACCAAACTTTTGCTCCACCAGGGTCCTCCACAACAACTAGTATTGTAGAAAGTATACCTTCCACCCCAAAATTCAGTGAGGAGTTGAAGGTTGCTTCTCAGTTAAGAAGATTCACATTCAACGAGCTTAAGTTGGCAACAAGGAATTTCAGACCAGAAAGTCTTCTTGGTGAGGGAGGATTTGGTTGTGTCTTCAAAGGTTGGATTGAAGAGAATGGGACTGCACCTGTGAAACCAGGTACTGGGCTTACCGTTGCAGTCAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAATGGCTTgcTGAAATAAGCTTTCTTGGCGACCTCATTCATCCTAATTTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGCGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGTCCCTgcctcttccttggtctatCAGGATGAAAATCGCACTTGGTGCTGCAAAAGGTCTTGCCTTTCTACATGAAGAGGCTAAAAGGCCAGTAATATATCGTGATTTCAAGACATCTAATATTCTATTAGATGCGgAATACAACGCCAAGCTCTCTGATTTTGGACTTGCGAAAGACGGCCCTGAGGGGGAAAAGACTCATGTTTCAACCAGAGTTATGGGAACATATGGTTATGCTGCACCGGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTATAGTTTTGGAGTAGTGCTACTTGAAATGCTCACTGGCCGAAGATCGATCGATAAAAATAGGCCAAATGGGGAACACAACTTGGTGGAATGGGCAAGGCCTGTTCTTGGAGACCGGAGGTTGCTCTTCCAGATAATTGATCCTCGCCTTGAAGGTCACTTCTCAGTTAAAGGAGCACATAAAGCTGCCCAGTTGGCTGCTCAATGCCTTAGCCGTGATCCAAAATCAAGACCTATGATGAGTGAAGTTATTCAAGCTCTAAGGCCTTTGCCAAACCTTAAGGATATGGCTGTCTCATCTTATCACTTCCAGGTCACACGAGTAGATCGAACCCTGTCCATGCCAAATCCTAAAAATGGTAACAAATCACAGTTAGCATCTGGAACAAGGAAAGGGCAACCTGCAAGGAGCTTGTCAAGTCCAAAAGGTCCACCTGGTTCTCCATATCACATCTATTTCAAATCACCACAACTTAATGGGAAAGGTTCATA 1439 0.4288 MGFGNDAIQAGSLGVGKSKGREKKDGAEKKSGCWAKFNCIRCCIPSTSQVENSLSGTSANYVENKSTCEKSKDQTFAPPGSSTTTSIVESIPSTPKFSEELKVASQLRRFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEISFLGDLIHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPVLGDRRLLFQIIDPRLEGHFSVKGAHKAAQLAAQCLSRDPKSRPMMSEVIQALRPLPNLKDMAVSSYHFQVTRVDRTLSMPNPKNGNKSQLASGTRKGQPARSLSSPKGPPGSPYHIYFKSPQLNGKGS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01274 479 PANTHER RECEPTOR-LIKE KINASE PLANT 57 468 - -
Bva03g01274 479 PANTHER OS01G0588500 PROTEIN-RELATED 57 468 - -
Bva03g01274 479 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
Bva03g01274 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Bva03g01274 479 Pfam Protein kinase domain 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01274 479 MobiDBLite consensus disorder prediction 426 479 - -
Bva03g01274 479 Gene3D Phosphorylase Kinase; domain 1 102 207 - -
Bva03g01274 479 Gene3D Transferase(Phosphotransferase) domain 1 208 424 - -
Bva03g01274 479 MobiDBLite consensus disorder prediction 426 452 - -
Bva03g01274 479 CDD STKc_IRAK 128 406 - -
Bva03g01274 479 ProSiteProfiles Protein kinase domain profile. 122 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01274 479 SUPERFAMILY Protein kinase-like (PK-like) 96 403 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01274 Bva-Chr3 12460937 12465658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01274 58 419 Glycoside Hydrolase AT3G07070 49.465 1.16e-117 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva03g01274 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01274 - - aprc:113861691 833.558