Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01252 ATGGGGTTCATGGGGGATTTGTGGGCACAATTAGGCTCAATAATGGCAACATTTCTGTTTGTCTACACCATGTCTGAGAGATTTGTCCCTCCTCTTTTTCTTGCCTATCTTCGAAAATATACtcataaaatatcaaactttCTGTATCCCTATATCCGTATTCACTTCTATGAGTTCACAGGCGAACGGTTCTTCAAGCGCAGCCAAGCATTCACTACCATCCAAACCTATCTCAGTGCAAATTCTTTCCAAAGAGCCAAAAGTTTCAAAGCTGAAGTTGTGAAAGACAGCCAAACCCCATTACTTACCATggctgaaaatgaagaaaccacAGATGAATTCCAAGGAGTCAAGCTATGGTGGAGTTCAAGCAcaatccaaccaaatcaacagtctttttctttttatcctaCTTCAAACGAGAAAAGGTTCCTAACTCTCACCTTTCACAAGCGCTATAGAGATCTCATTACTGGGTCTTATCTCAAACATGTCTTGGATGAAGGCAAAGCAATTGCTCTCAAGAATAGGCAATTGAAGCTCTATACGAACAATCCTAGCTCTGGTTGGTATGATTACAAAAGCACAAAGTGGAGCCATACAATTTTTGAGCACCCTTCTACTTTTGAAACTCTAGCTATGGAGCCAAAGAAGAAGCAGGAGATTCTCAATGACCTTGTTAAGTTCCAAAATGGCAAAGAGTACTATGCCAAGATTGGCAAGGCTTGGAAACGAGGGTATTTGCTATATGGTCCTCCGGGAACTGGCAAGTCTTCAATGATTGCTGCCATGGCCAATTTCCTGAACTATGACATATATGATCTTGAATTGACGGCAGTCAAGGAGAATGCAGAATTGAGGAAGCTGTTCATCGAAACTTCGAATAAATCTATTATGGTGATTGAGGATATCGATTGCTCACTTGATCTTACTGGccagagaaagaagaaacaaaagaaggatgatgatgatactGAAGCAAAAGATCCTATTACTAAGAaggcagaagaagaagaaaataaaggtaGCAAGGTGACTCTCTCAGGATTGTTGAATTGTATAGATGGGATTTGGTCAGCTTGTGGAGGGGAGAGGATCATAATTTTCACTACTAATTTTGTGGACAAACTTGATCCTGCTCTTATTAGGAGAGGAAGGATGGATAAGCACATAGAACTTTCCTATTGTTGCTTTGAAGCTTTCAAGGTGCTTGCAAAGAATTACTTGGGTGTTGAGTTCCATGAGTTGTTTCCTAAAATTGAAAAGCTATTGGAAGAGACTAATATGGCACCTGCTGATGTTGCTGAAAATGTGATGCCGAAATCAATAGATGAAGATGTTCATACTTGCTTGCAGAATTTGATTAACGCTCTTGAGTTGACAAAGGAGGAAGCGAAGAAAAAggcagaggaagaagaaaaagggttGAAggtggagaaagaaaaggaagaatatgCTCAGCAAGAGGTGAAAGCTAATGGAAAATCTGGGGAAGATGTTGAAGAGAATGGTTCAACCATTGAGTA 1526 0.3552 MGFMGDLWAQLGSIMATFLFVYTMSERFVPPLFLAYLRKYTHKISNFLYPYIRIHFYEFTGERFFKRSQAFTTIQTYLSANSFQRAKSFKAEVVKDSQTPLLTMAENEETTDEFQGVKLWWSSSTIQPNQQSFSFYPTSNEKRFLTLTFHKRYRDLITGSYLKHVLDEGKAIALKNRQLKLYTNNPSSGWYDYKSTKWSHTIFEHPSTFETLAMEPKKKQEILNDLVKFQNGKEYYAKIGKAWKRGYLLYGPPGTGKSSMIAAMANFLNYDIYDLELTAVKENAELRKLFIETSNKSIMVIEDIDCSLDLTGQRKKKQKKDDDDTEAKDPITKKAEEEENKGSKVTLSGLLNCIDGIWSACGGERIIIFTTNFVDKLDPALIRRGRMDKHIELSYCCFEAFKVLAKNYLGVEFHELFPKIEKLLEETNMAPADVAENVMPKSIDEDVHTCLQNLINALELTKEEAKKKAEEEEKGLKVEKEKEEYAQQEVKANGKSGEDVEENGSTIE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01252 508 PANTHER BCS1 AAA-TYPE ATPASE 6 490 - -
Bva03g01252 508 SMART AAA_5 243 397 IPR003593 -
Bva03g01252 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 471 IPR027417 -
Bva03g01252 508 Pfam Domain associated at C-terminal with AAA 30 123 IPR025753 -
Bva03g01252 508 Gene3D - 200 391 IPR027417 -
Bva03g01252 508 MobiDBLite consensus disorder prediction 466 502 - -
Bva03g01252 508 CDD AAA 244 395 - -
Bva03g01252 508 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 6 490 - -
Bva03g01252 508 MobiDBLite consensus disorder prediction 466 508 - -
Bva03g01252 508 ProSitePatterns AAA-protein family signature. 365 384 IPR003960 GO:0005524|GO:0016887
Bva03g01252 508 Coils Coil 448 488 - -
Bva03g01252 508 MobiDBLite consensus disorder prediction 315 338 - -
Bva03g01252 508 Pfam ATPase family associated with various cellular activities (AAA) 248 394 IPR003959 GO:0005524|GO:0016887
Bva03g01252 508 Gene3D - 392 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01252 Bva-Chr3 12191978 12193637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01252 218 393 Calmodulin-binding Proteins AT3G56690 29.121 9.05e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01252 - - pvu:PHAVU_004G024700g 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01252 03 12191978 12193637 Bva03g01252 03 12191978 12193637 ECH