Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01247 ATGGACAATCCACCCCATTGTGCTGAAAATAATGACTTTGAATCTGCTATTAGCTCCAGCCCCCAAGACCCAAATGTTAATGCCAGCACTAGCATCAGTCTATGTAGTAGCAGCGTGAGTAGTGGCAAGATGAACAAAATTGAGCCTCAACGGAGCACAGAATCTTTGGCGGACTGTGATGCAAGTTACAAGAGTAGCTCAAGTTGTGTGAGTGTGAGTAATTCCAACAGTTACGATGCAAATGAAGCCAGTTTTAGGAGCTTTTCCCCATCAAAACCCCACAAGGGCAATGATATCAGGTGGGATGCTATACAATGCGTGAAGGCTAAAGATGGGGATTTGGGTTTGGGGCATTTCAGGCTCTTAAAGAAGCTTGGATTTGGGGACATTGGGAGTGTATACTTGGCTGAGCTGAGAGGGATGGGGTGCTTGTTTGCTATAAAGGTTATGGATAAGGGCATGTTAGCTGGACGGAAGAAATTGGCTAGAGCTCAAACTGAGAGAGATATTTTGGGCTTGTTGGATCACCCTTTCCTTCCTACCctttattctcattttgagACTGAGAAATTCTCTTGCTTGCTTACGGAGTTTTGTAGTGGTGGGGACCTACACACGCTCCGGCAACGGCAACCCGGCAAACATTTTACAGAGCAAACAGCAAGGTTTTATTCTTCAGAAGTGCTTCTTGCACTTGAGTATCTTCACATGATGGGGGTGGTATACAGAGATTTAAAACCTGAAAATGTACTGGTGAGGGAAGATGGGCATATCATGCTTTCTGACTTCGATTTATCACTAAGATGTTGTGTGAGTCCCACCCTTGTTCAGTCCACCAAAGAACAAACTTGTCAAATGTCTTCTTACTGTATCCAACCATCATGTATTGATCCTACCTGCAAATTACCAGCTTGTGTGGAGCCTTCATGTTTGCAGCCCACTTGCTTCAAGCCCCATCTACTTAACTCCAAAAAAtccaaaggaagaaaaagtgaaaggTTAAGCTTAGGCAATTCAAATTCAGTTCCTGTACTTATTGCTGAGCCGACGAATGCCCGGTCTATGTCATTTGTTGGCACCCATGAATACTTAGCTCCTGAGATTATTAGAGGTGATGGTCATGGAAGTGCTGTGGATTGGTGGACATTTGGTATTTTCTTGTATGAGCTACTATTTGGAAGAACACCCTTTAAAGGTAACGGAAACCGCGAAACGTTGTTCAATGTTGTTGGTCAGCCTCTGAAATTTTCTGAGGGATCAAGCATCAGTTTTGCTGCAAAGGATTTGATAAGGGGATTGCTGGTTAAAGACCCACAGAAAAGGTTTGGATACAAAAGGGGCGCCACAGAGATCAAACAGCATCCATTCTTTGAAAGCATTAATTGGGCTCTCATTCGCAGTATCAATCCCCCAGAGATTCCAAAACCTGTTGATGTTGCATTTTTGAATCACACATTTAAATCATCTGTGCCTCCAAAAGACAAAGGTGCTACTGATTCAGATAGGTCTTCAGGTCCTTACTTggattttgaattctttta 1541 0.4192 MDNPPHCAENNDFESAISSSPQDPNVNASTSISLCSSSVSSGKMNKIEPQRSTESLADCDASYKSSSSCVSVSNSNSYDANEASFRSFSPSKPHKGNDIRWDAIQCVKAKDGDLGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAIKVMDKGMLAGRKKLARAQTERDILGLLDHPFLPTLYSHFETEKFSCLLTEFCSGGDLHTLRQRQPGKHFTEQTARFYSSEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSTKEQTCQMSSYCIQPSCIDPTCKLPACVEPSCLQPTCFKPHLLNSKKSKGRKSERLSLGNSNSVPVLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLFGRTPFKGNGNRETLFNVVGQPLKFSEGSSISFAAKDLIRGLLVKDPQKRFGYKRGATEIKQHPFFESINWALIRSINPPEIPKPVDVAFLNHTFKSSVPPKDKGATDSDRSSGPYLDFEFF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01247 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Bva03g01247 513 PANTHER FLIPPASE KINASE 1-RELATED 10 513 - -
Bva03g01247 513 Gene3D Transferase(Phosphotransferase) domain 1 351 475 - -
Bva03g01247 513 CDD STKc_phototropin_like 118 478 - -
Bva03g01247 513 Pfam Protein kinase domain 120 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01247 513 Pfam Protein kinase domain 354 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01247 513 SUPERFAMILY Protein kinase-like (PK-like) 94 485 IPR011009 -
Bva03g01247 513 SMART serkin_6 119 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01247 513 PANTHER PROTEIN KINASE 10 513 - -
Bva03g01247 513 ProSiteProfiles Protein kinase domain profile. 119 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01247 513 Gene3D Phosphorylase Kinase; domain 1 118 198 - -
Bva03g01247 513 Gene3D Transferase(Phosphotransferase) domain 1 199 270 - -
Bva03g01247 513 MobiDBLite consensus disorder prediction 12 29 - -
Bva03g01247 513 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01247 Bva-Chr3 12159181 12161241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01247 25 513 AGC Kinase Gene Family AT5G40030 73.116 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva03g01247 Pkinase 9.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01247 K08286 - qsu:112027816 825.469