Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01236 ATGAGGAAAGCTTCGCTAGATCTCAGGAATCGATTGCTACTCTGTGGCTTGATAAGTTTCTGTTTCTGGGGTTTTGCTGCTTCGCAGGCTGAAGATGATGTGAGATGTCTCAGAGAACTCAAAGAGTCGTTGAAAGATCCTCAGGGGAAGCTTCATTCGTGGCGATTCGATAATACCACAGTTGGGTTCATCTGCGAGTTTGTGGGTGTCTCGTGCTGGAACCCTCAGGAGAATCGGATCATCAATCTGGAGCTCCGAGAGATGGAACTCTCCGGCCAGGTGCCGGAGTCGTTGAAATATTGTAAGAATCTTCAAAAGCTGGATCTTGGGTCGAACGATCTGTCGGGGACGATCCCTTCTGAGATTTGTAGTTGGTTGCCGTTTTTAACACAACTGGACTTGTCGGAAAATGGTCTTTCTGGGACTATTCCCCCTACCCTTGTGAATTGTACTTATTTGAATGAGTTAATCCTTTCAAATAATCAGCTTTCTGGTACCATTCCTTATGAATTTGCAAGTTTGAGCAGGCTTAAGAGGTTTTCTGTTGCTAATAATCATCTTAGTGGTACTATTCCTTCGTTTTTAGATGGGTTTGCCAAGGAAGACTTCACTGGGAATAGTGATCTTTGTGGGGGTCCTCTTGGATCAAAGTGTGGAGGGTTGAGTAAGAAGAATCTTGCTATTATTATTGCTGCCGGGGTGTTTGGTGCAGCTGCTTCTTTGTTGTTGGCTTTTGGATTGTGGTGGTGGTACCATTTGAggttgatgaagaagaagaagggaggGTATGCGGATGGGCAGGATGATGATTGGGCTGTAAGGTTGAGGGGTCACAAGCTTGTTCAAGTTACCCTTTTCCAGAAACCTCTTGTAAAGGTTAAATTAGGGGATCTGATGGCAGCTACCAATAATTTTAGtgcagaaaatattattatttccacAAGAACAGGTACTACTTATAAAGCAGATCTTGCTGATGGGTCAACACTTGCTGTTAAGAGGCTGAATACCTGTAAGATTGGCGAAAAGCAGTTCCGAATGGAGATGAGTAGACTTGGCCAAGTTCGACACCCCAATCTGGCACCACTTTTAGGGTTTTGTATTGTGGAAGAGGAAAAGCTTCTGGTTTATAAGCACATGTCAAATGGGACTCTGCATTCCTTGTTGCATAAAAATGGTGATGTATTGGATTGGGGAATGAGATTCAGGATAGGCTTGGGTGCAGCTAGAGGTCTTGCTTGGCTTCATCATGGGTGCCATCCTCCAATTATACTCCAAAACATCTGTTCCAATGTGATTCTTGTTGACGAAGATTTCGATGCCCGAATAATGGACTTTGGTCTTGCTAGGCTTATGACATCTGACTCTAATGAAAGTAGTTTTGTGAATGGGGACTTAGGGGAGCTTGGCTATATAGCACCAGAATATCCAAGTACCATGGTTGCTTCACTAAAAGGGGATGCATATGGATTTGGTGTTGTGCTTTTGGAGTTGGTCACTGGGCGTAAACCTCTTGAAGTCAGCAATGGGGAGGAAGAATTTAAGGGAAAGCTAGTGGATTGGGTGAATATGCTTTCTAGTTCCGGTCGAATCAAGGATTGCATTGATAAGGCCATTTGTGGAAGAGGACATGATGAGGAGATCTTGCAGTTTCTGAAAGTTGCATTGAATTGCGTGGTTTCTCGCCCCAAAGATAGATGGTCTATGTACCAAGTTTATAATTCATTGAAGAGTATGCCTAGAGGCCACAGTTTCTCTGAACATGATGATGAGTTCCCGTTGATCTTTGGTAAGCCAGATAACGAGTCAACCTA 1814 0.4267 MRKASLDLRNRLLLCGLISFCFWGFAASQAEDDVRCLRELKESLKDPQGKLHSWRFDNTTVGFICEFVGVSCWNPQENRIINLELREMELSGQVPESLKYCKNLQKLDLGSNDLSGTIPSEICSWLPFLTQLDLSENGLSGTIPPTLVNCTYLNELILSNNQLSGTIPYEFASLSRLKRFSVANNHLSGTIPSFLDGFAKEDFTGNSDLCGGPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLMKKKKGGYADGQDDDWAVRLRGHKLVQVTLFQKPLVKVKLGDLMAATNNFSAENIIISTRTGTTYKADLADGSTLAVKRLNTCKIGEKQFRMEMSRLGQVRHPNLAPLLGFCIVEEEKLLVYKHMSNGTLHSLLHKNGDVLDWGMRFRIGLGAARGLAWLHHGCHPPIILQNICSNVILVDEDFDARIMDFGLARLMTSDSNESSFVNGDLGELGYIAPEYPSTMVASLKGDAYGFGVVLLELVTGRKPLEVSNGEEEFKGKLVDWVNMLSSSGRIKDCIDKAICGRGHDEEILQFLKVALNCVVSRPKDRWSMYQVYNSLKSMPRGHSFSEHDDEFPLIFGKPDNEST 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01236 604 Pfam Protein tyrosine and serine/threonine kinase 323 509 IPR001245 GO:0004672|GO:0006468
Bva03g01236 604 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 599 - -
Bva03g01236 604 SUPERFAMILY L domain-like 30 200 - -
Bva03g01236 604 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Bva03g01236 604 Gene3D Transferase(Phosphotransferase) domain 1 380 597 - -
Bva03g01236 604 SUPERFAMILY Protein kinase-like (PK-like) 283 576 IPR011009 -
Bva03g01236 604 Gene3D Phosphorylase Kinase; domain 1 266 379 - -
Bva03g01236 604 ProSiteProfiles Protein kinase domain profile. 305 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01236 604 PANTHER RECEPTOR-LIKE PROTEIN 55 14 599 - -
Bva03g01236 604 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Bva03g01236 604 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01236 Bva-Chr3 12107510 12109734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01236 1 602 Receptor kinase-like Gene Family AT3G28450 65.898 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Bva03g01236 PK_Tyr_Ser-Thr 4.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01236 - - lang:109347314 927.932