Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01225 ATGGAAGTCCCCGGTTCCGACGACCGGAAGCCACTTCAAAATTCGCGCTCTGCACTCAGAATTGGCCTCAACGAGGATCCCTCTCCTTTCTCCGAAATCCTACCTGACTCTGTCGATACCGTAGGAGATCACGGTGAAAACCCGCCGCCTCCGGCCGGTGGCCCGGGACGGATTCCCGTCGATTTTCAGGAATTCGTTTGCGGTGCATGCGGTGAGCAGAAGATAAAAGAGCAATTCGTGATCTGTGATGTCTGTGAGGGTTCGTTCGATTTGGGCTGTGCGGAAATGTGCCGCTGGGAAGCTGAGCTCCTCGATGAATGGGTTTGTGGAAAGTGCAGCTTTGAAGAGGCAAGGAGTGAAGAATTGGAGGATTTGAGAGGACATGGTGAAGTGAATCCTAATGGGGCCAGAAATAAAAGGATGAAGATGGCTCAGGATGGAAATTTAAGACCCTGGTCAGATCTTCCAGAAGCTTTGCTAGACCAAATAACAAGGCATTTTGGTGTGGTAGACTATCTCATGTTTGGCTGCGTTTGTAAGTCTTGGAGGTCATATACCTCTGCATACAAGCAAGAATTCTTGGCATCGCAAACCCcgcatattctttttttgtcacCTTATGCTAGAAAGTCTTGCTATTTCTACAACCCATTTGAGCACAAAATGTACAAGGCACTACTTCCAAGTCTTGTTGGAAGATTTTGTGCCGGAATCACTGGTGGTTACTTGGTCATggataacaaaaaagaaaaggcagaTAAACCACTCTGGCTCGTGAATCCTATTACAAGACACGAACTCTATTTTCCAAGATCTCCACATCGCTTGTGCCGTATATTCCTTGCGTCTGTATCTATACCAAGAGGAGAATTAATGTTAATTGGTATATCTATGTTTCGCTCAGTTTTGCAGTTCTGTAGATCCAGTGATGTCCAGTGGACTACTTATGAATTTCAAGGGCATGAACTGCCTATTGATGGTGCTTTTTTCAAAGGCAAGCTATACTTAATAACTGATGTAGGAAGAATTTTGCAGTTTGATCCAAGTTCCCCTCCTTACTACATCAAACTTGGAGTGGGAAGCATCCCAAATCCAACACTACAGATGCGTCTAGTGGCGTCTGAGGAGCAGCTCTTTGTGCTTGTTACATCTTATGAAGAACATCATAGAATTTATATGTTGGACTTTCAGATGAAGTTGTGGATAACAGTGCAGAGTTTGGGAGATCAAGCCTTGTTCATTGGTAATCGTATAGGTTCGTTAGGGTCATGCACCAAGGTCAATTCGGAAGAAGGTTGCCAAAGTGCTCGCGACTGCATATTGGAAGTCGGATATGGTTGCAGTGAAAAATTCACCGTGCGTCCTTTGGGTGAAAATATTCATTGGCGGACACAGATTAAAATAAACGGATGGTGTGGGGTGCCTACCTCTATCGATAATgcattttggtattttcctCACTTAGCTAGTAATGTAGATTCTTTAAGCCAATA 1493 0.43 MEVPGSDDRKPLQNSRSALRIGLNEDPSPFSEILPDSVDTVGDHGENPPPPAGGPGRIPVDFQEFVCGACGEQKIKEQFVICDVCEGSFDLGCAEMCRWEAELLDEWVCGKCSFEEARSEELEDLRGHGEVNPNGARNKRMKMAQDGNLRPWSDLPEALLDQITRHFGVVDYLMFGCVCKSWRSYTSAYKQEFLASQTPHILFLSPYARKSCYFYNPFEHKMYKALLPSLVGRFCAGITGGYLVMDNKKEKADKPLWLVNPITRHELYFPRSPHRLCRIFLASVSIPRGELMLIGISMFRSVLQFCRSSDVQWTTYEFQGHELPIDGAFFKGKLYLITDVGRILQFDPSSPPYYIKLGVGSIPNPTLQMRLVASEEQLFVLVTSYEEHHRIYMLDFQMKLWITVQSLGDQALFIGNRIGSLGSCTKVNSEEGCQSARDCILEVGYGCSEKFTVRPLGENIHWRTQIKINGWCGVPTSIDNAFWYFPHLASNVDSLSQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01225 497 MobiDBLite consensus disorder prediction 1 56 - -
Bva03g01225 497 SUPERFAMILY F-box domain 143 187 IPR036047 GO:0005515
Bva03g01225 497 Gene3D - 152 189 - -
Bva03g01225 497 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 121 IPR013083 -
Bva03g01225 497 PANTHER F-BOX PROTEIN 139 496 - -
Bva03g01225 497 PANTHER OS09G0392200 PROTEIN 139 496 IPR044619 -
Bva03g01225 497 Pfam F-box domain 152 186 IPR001810 GO:0005515
Bva03g01225 497 SUPERFAMILY FYVE/PHD zinc finger 57 114 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01225 Bva-Chr3 12001241 12003285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01225 13 120 C2H2 Transcription Factor Family AT3G01460 32.231 3.51e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01225 - - qsu:111986227 293.123