Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01220 ATGGAGAGCTCGGAGAAGGTTGTTGCAGTGATTATGGTGGGTGGACCCACTAAAGGGACCAGTTTTCGACCTCTTTCCTTCAATACTCCGAAACCCCTTTTCCCTTTGGCTGGACAGCCAATGGTTCATCACCCTATTTCCGCTTGCAAGaggATACCCAATTTGGCTCAAATATATCTGATTGGGTTCCATGAGGAACGGGAATTCTCACTATATGTATCTTCCATTTCAAATGAGCTGAAATTACCAGTGAGATATTTGAAGGAGGATAAACCACACGGTTCCGCGGGTGGCCTATATTACTTCAGAGACATTATCATGGAAGACAGTCCGTCACATATATTTCTCCTAAATTGTGATGTTTGCTGCAGTTTTCCCCTACCTGCTATGCTTGAAGCCCATAAAAGATATAGTGGGATAGGGACCATGTTAGTAATTAAGGTCTCTGCGGAATCTGCCAGCCAATTTGGTGAATTAGTTGCTGATCCAGTCACTAATGAATTGTTGCATTATACAGAGAAACCTGAGACTTTTGTTAGTGATTTGATTAATTGTGGTGTCTATCTTTTCACCCCTGAAATTTTTACTGCCATTCAAAATGCAATCTTTGATCGGGAGGACAGAGCTAATCTACGCCGCGTCTACAGCTTTGAAACTCTACAATCAACAAGGACTCTTCCTGCAGATTTTGTGAGACTGGATCAAGATATTTTATCACCTCTAGctggaaagaagaaattgtatACATACGAGACAAAGGATTTCTGGGAGCAAATTAAAACTCCTGGAATGTCTTTGAAATGCTCAGAGCTGTATCTTGCCCAATTCCGGTTTACTTCACCCGATCTTCTGGCCAGTGGAGATGGGAAAAAGAATGCTACAATTGTGGGTGATGTATATATTCATCCATCAGCCAAAGTACATCACACTGCAAAGATTGGGTCGAATGTTTCTGTCTCAGCAAATGTTCGTGTAGGTGCAGGCGCCAGGCTAATCAATTGTATCATCTTGGATGATGTTGAAATTAAGGAAAATGCGGTGGTTATAAATTCTATTGTTGGATGGAAGTCATCAATCGGGAAATGGTCACGGGTGCAGGCTGATGGAAACTACAATGCAAAGCTTGGGATAACCATCCTTGGAGAAGCTGTTGCAGTTGAAGATGAGGTGGTGGTGATCAACAGCATTGTTCTTCCCAATAAGACTCTCAATGTCAGCGTACAAGAAGAAATCATCTTATG 1241 0.4142 MESSEKVVAVIMVGGPTKGTSFRPLSFNTPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFHEEREFSLYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPAMLEAHKRYSGIGTMLVIKVSAESASQFGELVADPVTNELLHYTEKPETFVSDLINCGVYLFTPEIFTAIQNAIFDREDRANLRRVYSFETLQSTRTLPADFVRLDQDILSPLAGKKKLYTYETKDFWEQIKTPGMSLKCSELYLAQFRFTSPDLLASGDGKKNATIVGDVYIHPSAKVHHTAKIGSNVSVSANVRVGAGARLINCIILDDVEIKENAVVINSIVGWKSSIGKWSRVQADGNYNAKLGITILGEAVAVEDEVVVINSIVLPNKTLNVSVQEEIIL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01220 413 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 275 IPR029044 -
Bva03g01220 413 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 355 IPR029044 -
Bva03g01220 413 CDD M1P_guanylylT_A_like_N 9 272 - -
Bva03g01220 413 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 5 413 - -
Bva03g01220 413 Pfam Nucleotidyl transferase 9 202 IPR005835 GO:0009058|GO:0016779
Bva03g01220 413 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 5 413 - -
Bva03g01220 413 Gene3D Hexapeptide repeat proteins 285 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01220 Bva-Chr3 11974923 11979745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01220 1 365 Eukaryotic Initiation Factors Gene Family AT2G34970 22.864 1.72e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01220 K00966 - mnt:21393802 719.539