Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01204 ATGGGAGGTGGAACCGAAGCTTTCCCTGATCTCGGAAAACACTGCCAACACCTCGATTGCAACCAACTcgattttcttcctttcacaTGCGACGGTTGCCACAAGGTGTTTTGTCTAGAACATAGATCTTTCAAGTCGCATAGTTGCCCAAAATCCGACGATAAAAGCAGGAAGGTTGTGGTCTGCGAAACATGTTCAATGGCGATCGAGACCACGGGTTACAATGGAGAGGACGAGAAAGCTATATTGGAGAAGCATGAGAAATCTGGGAACTGTGAccccagaaagaaaaagaaacctgTTTGTCCGGTGAGGCGATGCAAGGAGGTTTTGACCTTTTCCAATACCAGTACTTGTAAAACTTGCCAAATGAAGGTGTGCCTCAAGCACCGTTTCCCGGCTGACCATGATTGCAAAAGGGTGGCGCCGCCGCGGTCTTTGTCGTCGTCGGTGGCAGCAGCGGCTGGTGGGCGATGGACTGATCGGTTCTTGGCTGCTCTGGCTTCAAGGAATGGAAAAGATTGTGCCAAGAATGGAAGTCGTTCTAATTCTCCTCCAAGTTCATCTCCTTCTGTTAAAGTACATTG 587 0.4583 MGGGTEAFPDLGKHCQHLDCNQLDFLPFTCDGCHKVFCLEHRSFKSHSCPKSDDKSRKVVVCETCSMAIETTGYNGEDEKAILEKHEKSGNCDPRKKKKPVCPVRRCKEVLTFSNTSTCKTCQMKVCLKHRFPADHDCKRVAPPRSLSSSVAAAAGGRWTDRFLAALASRNGKDCAKNGSRSNSPPSSSPSVKVH 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01204 195 MobiDBLite consensus disorder prediction 175 195 - -
Bva03g01204 195 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Bva03g01204 195 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Bva03g01204 195 SUPERFAMILY AN1-like Zinc finger 5 52 IPR035896 -
Bva03g01204 195 Gene3D - 77 155 IPR035896 -
Bva03g01204 195 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Bva03g01204 195 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Bva03g01204 195 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 5 177 - -
Bva03g01204 195 MobiDBLite consensus disorder prediction 173 195 - -
Bva03g01204 195 Gene3D - 2 68 IPR035896 -
Bva03g01204 195 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Bva03g01204 195 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Bva03g01204 195 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 177 - -
Bva03g01204 195 SUPERFAMILY AN1-like Zinc finger 94 143 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01204 Bva-Chr3 11862344 11863345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01204 2 175 C2H2 Transcription Factor Family AT3G28210 63.793 5.39e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01204 - - qsu:112006707 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01204 03 11862344 11863345 Bva03g01204 03 11862344 11863345 ECH