Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01189 ATGGCAGTTGCCGGAGGCAGCAGTGTCGGCGTTCACGGGTGGGCCGACGTGAAGAGCCTGGCCGTCCAAGTCATCACCGGGCGGTGGTTCGTGGTGTTTGCCTCATTTCTGATCATGGGAGCTTCCGGAGCTACCTACATGTTCAGCCTCTACTCCCCCGACATCAAATCTGCTCTGGGCTACGACCAAACCACTCTCAACCTCCTTAGCTTCTTCAAAGACTTAGGAGCAAACCTCGGTGTCTTCTCTGGTCTGATCAACGAGATCACGCCGCCATGGGTGGTCTTGTCCATGGGTGCCGTGCTGAACTTCTTTGGCTACTTCATGATCTGGCTTGCTGTGACACATAGAATAGCCAGACCCCAATTGTGGATGATGAGCCTCTATATCTACCTAGGTGCCAATTCTCAGTCTTTTGCCAACACGGGCTCCCTTGTCCCCTGTGTAAAGAACTTCCCTGAAAGCCGCGGCGTCGTTTTGGGCATTACCAAGGGCTATGTGGGTCTCAGTGGAGCCATCATCACAGCGCTATACTATGCCTTCTATTTTAATGACACTAGGAGTTTAATTTTGCTCATAGGATGGCTCCCTGCTGCTATATCCTTTACTTTTCTTCGAACAGTTCGATACATTAGGCCGGTTCACCAGCCAAATGAGCTCAAGGTGTTCTATAAATTCCTCTATATTTCCCTTGGTCTTGCTGGGTTTTTAATGGTTATGATCATTATggagaaaaaattcaactttaCCAGGAGTGAGTATGGTTTGAGTGCTGGTATGGTGATTTTCTTCCTATTCCTCCCACTTGCTGTTGTTATCCTTGAAGAATTCAAGATCTGGCAGAGTAAGAAGCTGGCAATGATTGATCCTTCGCCGGTGAAAATAGTCACCCAAGGTGAAAAGATCAATTCAGAAGAGACTACTTCGAACGCAAACTCTCTCTCAGACCTTTCATCGAACAGTAAGGAAACAATTTCCCCAAAACCAACCGAAGAAGTTAGATGGTGGCAAAATGTGTTTAACCCACCACCAAGAGGTGAGGACTACACCATTCTTCAAGCCCTTTTCAGCATAGACATGATAGTTCTATTCATTGCTGGAACTTGTGGCGTTGGAGGAACACTAACAGCAATTGACAATCTGGGTCAAATTGGAGCCTCGTTGAGATACCCAAAGAAGAGCATAAGCACTTTTGTGTCACTGGTGAGCATTTGGAATTACCTAGGAAGAGTTTTCTCAGGTTTTGTTTCTGAACATATTCTGGTAAAATACAAGTTCCCTCGTACTCTAATGCTCACTCTGATTCTGCTATTGGCATGTGTTGGTCACCTGCTAATAGCCTTTGGAGTTCCCGGAGGCCTTTACGTTGCTTCTGTGATAATtggcttttcttttggtgCCCAATGGCCGGTGATTTTCGCCATAATATCAGAGCTTTTTGGACTGAAATACTATTCAACTCTGTACAACTTTGGGGGCATGGCGAGCCCAATTGGGCTCTATGCGCTTAATGTCAGAGTTGCTGGCCATTTGTATGATGTGGAAGCAAAGAAGCAATTGGCAGCAATGGGGCTAAAAAGACAGGAAGGGAAGGAATTGACTTGTGTTGGGACCAATTGCTTCAAAATGTCCTTTCTTATTATCACTGCTGCGGCTCTGTTCGGTGCCATGATTTCGCTTATTCTGGTGGCTCGGACAAGGAAGTTTTACAAAACTGATATATACCGGAGATACCGGGAGGCGGCGGCGGAGCTGCCGACGGAGATTACGCCGGTAGACGCCGGCAAGAAGCCAAGTGACGAAGGATTGAAGagtta 1817 0.4606 MAVAGGSSVGVHGWADVKSLAVQVITGRWFVVFASFLIMGASGATYMFSLYSPDIKSALGYDQTTLNLLSFFKDLGANLGVFSGLINEITPPWVVLSMGAVLNFFGYFMIWLAVTHRIARPQLWMMSLYIYLGANSQSFANTGSLVPCVKNFPESRGVVLGITKGYVGLSGAIITALYYAFYFNDTRSLILLIGWLPAAISFTFLRTVRYIRPVHQPNELKVFYKFLYISLGLAGFLMVMIIMEKKFNFTRSEYGLSAGMVIFFLFLPLAVVILEEFKIWQSKKLAMIDPSPVKIVTQGEKINSEETTSNANSLSDLSSNSKETISPKPTEEVRWWQNVFNPPPRGEDYTILQALFSIDMIVLFIAGTCGVGGTLTAIDNLGQIGASLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHILVKYKFPRTLMLTLILLLACVGHLLIAFGVPGGLYVASVIIGFSFGAQWPVIFAIISELFGLKYYSTLYNFGGMASPIGLYALNVRVAGHLYDVEAKKQLAAMGLKRQEGKELTCVGTNCFKMSFLIITAAALFGAMISLILVARTRKFYKTDIYRRYREAAAELPTEITPVDAGKKPSDEGLKS 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01189 605 PANTHER MFS TRANSPORTER 11 598 - -
Bva03g01189 605 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 598 - -
Bva03g01189 605 SUPERFAMILY MFS general substrate transporter 28 568 IPR036259 -
Bva03g01189 605 Pfam Nodulin-like 28 273 IPR010658 -
Bva03g01189 605 Gene3D MFS general substrate transporter like domains 353 572 IPR036259 -
Bva03g01189 605 Pfam Major Facilitator Superfamily 383 563 IPR011701 GO:0022857|GO:0055085
Bva03g01189 605 MobiDBLite consensus disorder prediction 304 325 - -
Bva03g01189 605 CDD MFS_Mch1p_like 27 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01189 Bva-Chr3 11687322 11689139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01189 15 580 Nodulin-like Gene Family AT2G39210 68.198 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01189 - - pvu:PHAVU_007G024800g 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01189 03 11687322 11689139 Bva03g01189 03 11687322 11689139 ECH