Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01158 ATGAATAACTCAGTTTCAGATCACAGTTTTTACGTTGACAGTGATGAAGATGAGGAAAAGGAGTTCAATAAAGGTGAAGAAGAGGACGGAAACGATTCAGATTCTTCCAATTACTCGAATGAAAACCAGAATCAGAACAAACCCAGTTCCTACAACACCACGTGGCCTCAGAGTTACAGGCAGTCAATTGATCTATATAGTAGCGTACCATCTCCAAATATTGGGTTTTTGGGAACCCCTTCATTGTCCAGATTAAGCagctcctttctttcttcatctttaaCAAGAAGACACACTCCCGAAACACTACCTTCAGTAACAAAACCTCTGTTACAGCCACCAGTTGAAGAGCATCAGAAACGTAGCTCGCATTCCTTGCTTCCCCCAATTCCTTCAAGGAGGTCATCAATTAGGAAGGATTCCAAGGTTTCTCACGAAGTTCCAATTTCTCGTCACTGCTCTTATGGACAAGCCGTGCTTAATGGCATAAATGTTCTCTGTGGTGTGGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGCTTGGGCTATctatcttgtttatttttgcaatCCTTTCCTTCTATACTGGGATCCTCTTGCGTTACTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCTGCTTTTGGTCGTGCAGGACGTATTGCCATTTCGATAATACTATACGTGGAATTATATGCTTGTTgcattgaatatataattttggagGGTGACAACTTGTCTTCACTATTTCCAAATGCGTGCATAAGTTTATGtggaattgaattgaattctcACATCCTGTTTGCACTGATGACCACCTTGGCTGTTCTTCCAACTGTTTGGCTCCGTGACCTAAGTATTCTCAGTTACATTTCAGCTGGTGGAGTTATTGCATCAATTTTGGTGACTCTCTGCCTGCTCTGGGTTGGCGTTGTTGATGAAGTTGGATTTCATAGCAAGGGGACAACTACACTGAATCTTGCAACTCTTCCTGTTGCTTTGGGTCTCTATGGTTATTGCTACTCAGGACATGCTGTGTTCCCAAACATCTATACATCAATGGCAAATCCAAACCAGTTTCCTGCAGTACTCTTGGCATGTTTTGGTATATGTACTATCCTGTATGCTGGAGTGGCTGTCATGGGGTATACAATGTTTGGAGAATCTACTCTTTCTCAGTTCACACTAAACATGCCAAAAGATTTAGTGGCCACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCTCTGACCATATCTCCAGTAGCAATGAGTCTTGAGGAATTGATACCGTCAAACCATGGCAAGTCTTATATATATGCCATCTTCATCAGAACAGGGCTAGTAGTTTCTACCCTGGTTGTTGGCCTTATGGTTCCCTTTTTTGGTCTGGTGATGTCTTTAATCGGATCTTTGCTCACAATGCTAGTTACCTTGATACTTCCCTGTGCTTGTTTCCTAAGCATCTTGAGGGGCAAAGTCTCTCGCCTACAGGTGGCAATTTGTGCTGTAGTAATCACAGTAGGTGTTGTGTCATCTGCCTTCGGAACATACTCGGCGCTCTCCAAGATTGTTGAGAGTTTGCATGGATA 1634 0.4131 MNNSVSDHSFYVDSDEDEEKEFNKGEEEDGNDSDSSNYSNENQNQNKPSSYNTTWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSSSLTRRHTPETLPSVTKPLLQPPVEEHQKRSSHSLLPPIPSRRSSIRKDSKVSHEVPISRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILFIFAILSFYTGILLRYCLDSEPGLETYPDIGQAAFGRAGRIAISIILYVELYACCIEYIILEGDNLSSLFPNACISLCGIELNSHILFALMTTLAVLPTVWLRDLSILSYISAGGVIASILVTLCLLWVGVVDEVGFHSKGTTTLNLATLPVALGLYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFGICTILYAGVAVMGYTMFGESTLSQFTLNMPKDLVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHGKSYIYAIFIRTGLVVSTLVVGLMVPFFGLVMSLIGSLLTMLVTLILPCACFLSILRGKVSRLQVAICAVVITVGVVSSAFGTYSALSKIVESLHG 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01158 544 MobiDBLite consensus disorder prediction 94 138 - -
Bva03g01158 544 Pfam Transmembrane amino acid transporter protein 154 533 IPR013057 -
Bva03g01158 544 PANTHER AMINO ACID TRANSPORTER AVT1B 26 541 - -
Bva03g01158 544 MobiDBLite consensus disorder prediction 1 55 - -
Bva03g01158 544 MobiDBLite consensus disorder prediction 35 55 - -
Bva03g01158 544 PANTHER OS05G0424000 PROTEIN-RELATED 26 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01158 Bva-Chr3 11195953 11204824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01158 1 477 Amino Acid or Auxin Permease AAAP Family AT2G39130 74.486 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01158 K15015 - gmx:100775840 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01158 03 11195953 11204824 Bva03g01158 03 11195953 11204824 ECH