Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01154 ATGAAGAAGCTCAAGCTCAAGGCTTTTTCTGGTTTCTGCTGCAGAATTCTATGGTTAACCGTTGTAATTTTGAGCTCCTTGAGATTGGTCCAGTGCCAACAAGCGAGTGATTTGAACCAATTCAACAATCCTTTGCTCTTGAATGACCAGCTCTCCAATCTTACTGCGGTTCTTAGCCAGGAAATCAAGAGAAAATTCAGCTTCTGCATCAAAGACCCGGAAGCAGAATGGAACCAAGCATTTAACTTTTCATCTGATCCAGGGTTCTTGTCATCTTGCATGCTGAAGACTAAAGGTGATATTAGTCGACGTATATGCACAGCAGCAGAAGTGAAGTTTTACTCTAGTACTTTCTCTGAAAGAATTGGCAAATATTTGAAGCCTAACAGGAACTGCAATTCAACCTCATGGGTTGGTGGTTGCGAGCCTGGATGGGCCTGTAGCTCAGATCAGGAGGTTGACATAAATTCAGAGGATATTCCGACAAGAACCAGAAACTGTCAGTCGTGTTGTGATGGCTTCTTCTGTCCTGAGGGTTTAACTTGCATGATACCTTGCCCATTGGGTTCCTATTGCACTCTTGCAACATTAAATGAAACAACTGGTTTATGCGAACCATACCTGTACCAACTACCAGGAAACCCGCCAAACCACACTTGTGGAGGAGCAAATATTTGGGCCGATGTCGGTAATAGTCAAGAGATGTTTTGTCCAGCTAGATCATATTGTCCAACAACCacaaaaaaacttaattgcAGTAGTGGGCACTACTGCAGGATGGGGTCTATATCTGAGAAACGTTGCTTCGACTTGACATCGTGTAAAGCAAACACTGAAAAACTGGAACTTCATGTCTATGGAATCATATTCATAGTCGCTCTAAGTTTTTTGTTGCTCATAATCTACTGCTGCTCCGACCGAATTCTTATAATTAGGgagagaagacaaaaaaaatcaagagatGCAGCTGCTGCAAGTGCAAAGAAGACAGCAAAAGCGCGCCAAAGGTGGAAAGATGCAAAAAATGCAGCTATGAATCAAGCTAGTAGGATGCAATCTCActtttctttcacattttctcGCAAAAGGAATGAAACAAAATCAGAAGAACTTCAGATGTTGAGTATACCTGAGACAGATGATGACGATGATGTGTTCTCATTTCCACATTCTAGTGCTTCAACAGCAACTGTGCACTCTCCAGTAATATCAAAGTGGCAGCAAACTGAGCCAAGTCACCAAATGGAAAGAAggcaagaaattgaaaatgtagCTGTTGGTGATGATGGATATGATGTTGAAACTGGAAGcaatattattaaagaaaacaagtcaaaagggaaaaagctAAACAGTCGTAGCAAGATCTATAGGCATGCATATTCACGGCTTGAGAAGGAAAAGGCTCAGgaacaagaacaaaagaacCTTACTTTCACAGGAGTAGTTAACGTGGCAACCCACAGTGAACCACGAAAAAGGCCTCTAATTGAGATTTCTTTCAAAGATCTAAGTCTTACTTTAAAATCCCAGAACAAGTACATATTAAGAAGTGTTACAGGGACAATAAAACCTGGCCGCATTACTGCTGTCATGGGTCCATCTGGGGCTGGTAAAACAACATTTCTTTCAGCTATAGCAGGAAAGGCATTTGGATGCAGAATGACCGGTTCGATTCTTATCAATGGAAGGAATGAATCAATTCATTCTTACAAGAAAATTGTTGGTTTTGTGCCACAAGATGATATTGTTCATGGAAACCTTACAGTGGAAGAGAATGTCTGGTTCAGTGCAAAATGCAGGCTGTCCACTGGCTTGTCGAAAGCGGATAAAGTTGTGATTGTAGAAAGAGTTATTGAATACTTGGGGCTTCAGGCTGTGAGGAATTCTCTTGTTGGAACTGTAGAACAGCGAGGCATATCGGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAGATGGTCATGGAACCTTCACTCTTGATTTTGGATGAACCCACCTCTGGTTTGGACAGTGCATCATCTCAACTTCTTATTAGAGCACTTAGGCGCGAAGCTCTTGAGGGGGTGAACGTTTGCTTGGTCGTTCACCAACCCAGCCATACCTTGTTCAACATGTTTGATGATTTAGTACTCCTTGCAAAAGGTGGTCTAACTGTATATCATGGACCCATCAATGAAGTTGAAGGATACTTTGCTGCTCTCGGGATCGTTATTCCGGAGAGAATAAATCCTCCAGACTACTTTATTGACATTTTGGAGGGCATAGTGGTGCCTAATGGAAGCTCAGAAGTAAATTACATGGAGCTTCCAGTTAGATGGATGCTTCACAACGGGTACCCAGTACCTCCAGATATGCAACAGAATGAAGCAGCACTTGCCATGTCCTCAAGGGGTGAAAATCCCCTTGATGAAATAAATCATCTCGATGATGCTACTGTGGAACAATCTTTCACTGGGGAGTTGCTGAAAGATGTGAGGGGTAATATAAAGATGCATCATGAGAAGATAAGGCTAAATTTCTTGAAGTCCAAGGATTTATCGAATCGAAGAACTCCCAGTGTTTTCCAGCAATATAAATACTTCCTTGGAAGAGTCACTAAGCAGAGACTACGCGAAGCCAAAACACAAGGCATAGACTATCTGATTCTATTACTTGCTGGTGCCTGCCTAGGATCACTGGttaaaatgaaagatgaaTCATTTGGTGCAGATGGATACACATACACTGTGATTGCTGTTTctCTTCTTTGTAAAATAGCAGCTTTGAGATCATTTTCCCTTGATAAATTACAACACTGGAGGGAGAGTGCTTCGGGCATGAGCAGCTTGGCTTATTTTCTTGCTAAGGACACAATTGACCATTTTAATACAGTTATCAAGCCTGCAGTTTACCTGTCAATGTTCTATTATTTCACCAATCCAAGGTCTACATTTGTGGATAATTACACTGTGCTACTATGCCTTGTCTACTGTGTAACCGGCATCGGCTATCTCATGGCCATCTTATTTGAACCTGGAGCTGCCCAACTGTGGTCAGTACTCCTTCCAGTTGTTGTGACTCTGATTGCGACGCGACGAAGAGATGGTGAATTTATAAAGCTGATATCTAATTTATGCTACTCTAACTGGGCTCTGCAAGCATTTGTAATTGCAAATGCTAAAAGGTACAGTGGAGTGTGGCTCTTAAGTCGATGTGCCTTGCTTATGAAAAGTGATTATGATCTTAATGACTGGAATTTGTGCTTATCCATCCTAATCCTCTTTGGTGTAGTTAGCCGTGTAATAGCATTCTTCTGTAtgttaatatttcaaaagaagTG 3323 0.3999 MKKLKLKAFSGFCCRILWLTVVILSSLRLVQCQQASDLNQFNNPLLLNDQLSNLTAVLSQEIKRKFSFCIKDPEAEWNQAFNFSSDPGFLSSCMLKTKGDISRRICTAAEVKFYSSTFSERIGKYLKPNRNCNSTSWVGGCEPGWACSSDQEVDINSEDIPTRTRNCQSCCDGFFCPEGLTCMIPCPLGSYCTLATLNETTGLCEPYLYQLPGNPPNHTCGGANIWADVGNSQEMFCPARSYCPTTTKKLNCSSGHYCRMGSISEKRCFDLTSCKANTEKLELHVYGIIFIVALSFLLLIIYCCSDRILIIRERRQKKSRDAAAASAKKTAKARQRWKDAKNAAMNQASRMQSHFSFTFSRKRNETKSEELQMLSIPETDDDDDVFSFPHSSASTATVHSPVISKWQQTEPSHQMERRQEIENVAVGDDGYDVETGSNIIKENKSKGKKLNSRSKIYRHAYSRLEKEKAQEQEQKNLTFTGVVNVATHSEPRKRPLIEISFKDLSLTLKSQNKYILRSVTGTIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCRMTGSILINGRNESIHSYKKIVGFVPQDDIVHGNLTVEENVWFSAKCRLSTGLSKADKVVIVERVIEYLGLQAVRNSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLIRALRREALEGVNVCLVVHQPSHTLFNMFDDLVLLAKGGLTVYHGPINEVEGYFAALGIVIPERINPPDYFIDILEGIVVPNGSSEVNYMELPVRWMLHNGYPVPPDMQQNEAALAMSSRGENPLDEINHLDDATVEQSFTGELLKDVRGNIKMHHEKIRLNFLKSKDLSNRRTPSVFQQYKYFLGRVTKQRLREAKTQGIDYLILLLAGACLGSLVKMKDESFGADGYTYTVIAVSLLCKIAALRSFSLDKLQHWRESASGMSSLAYFLAKDTIDHFNTVIKPAVYLSMFYYFTNPRSTFVDNYTVLLCLVYCVTGIGYLMAILFEPGAAQLWSVLLPVVVTLIATRRRDGEFIKLISNLCYSNWALQAFVIANAKRYSGVWLLSRCALLMKSDYDLNDWNLCLSILILFGVVSRVIAFFCMLIFQKK 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01154 1107 Pfam ABC transporter 516 668 IPR003439 GO:0005524
Bva03g01154 1107 SMART AAA_5 525 717 IPR003593 -
Bva03g01154 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 736 IPR027417 -
Bva03g01154 1107 Gene3D - 486 736 IPR027417 -
Bva03g01154 1107 CDD ABCG_EPDR 497 723 - -
Bva03g01154 1107 Pfam ABC-2 type transporter 697 1107 IPR043926 GO:0140359
Bva03g01154 1107 Coils Coil 454 474 - -
Bva03g01154 1107 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 499 741 IPR003439 GO:0005524
Bva03g01154 1107 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 33 1104 - -
Bva03g01154 1107 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 1104 - -
Bva03g01154 1107 ProSitePatterns ABC transporters family signature. 640 654 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01154 Bva-Chr3 11153527 11162428 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01154 494 700 Calmodulin-binding Proteins AT2G36910 28.302 8.28e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01154 - - lang:109341040 1492.63