Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01151 ATGAAGAAGCTCAAGCTCAAGGCTTTTTCTGGTTTCTGCTGCAGAATTCTATGGTTAACAGTTGTAATTTTGAGCTCCTTGAGATTGGTCCAGTGCCAACAAACGAGTGATTTGAACCAATTCAACAATTCTTCGCTCTTGAAAGACCATCTTGCCAATCTTACTGCGGTTCTTAGCCAGGAAATCAAGAGAAAATTCAGCTTCTGCATCAAAGACCCGGAAGCAGAATGGAACCAAGCATTTAACTTTTCATCTGATACAGAGTTCTTGTCGTCTTGCATGCTGAAGAGTAAAGGTGATATTAGTCGACGTATATGCACAGCAGCAGAAGTGAAGTTTTACTCTAGTACTTTCTCTGAAAGAATTGGCAAATATTTGAAGCCTAACAGGAACTGCAATTCAACCTCATGGGTTGGTGGTTGCGAGCCTGGATGGGCCTGTAGCTCAGATCAGGAGGTTGACATAAATTCAGAGGATATTCCGACAAGAACCAGAAACTGTCAGTCGTGTTGTGACGGCTTCTTCTGTCCTGAGGGTTTAACTTGCATGATACCTTGCCCATTGGGTTCCTATTGCACTAATGCAACACTAAATGAAACAACTGGTTTATGCGAACCTTACCTGTACCAACTACCAGGAAACCTGCCAAACCATACTTGTGGAGGAGCAAATATTTGGGCTGATGTCCGTAATGGTAAAGAGATGTTTTGTCCAGCTGGATCATATTGTCCAACAACcacaaaaaaacataattgcaGTAGTGGGCACTACTGCAGGATGGGGTCTATATCTGAGAAACGTTGCTTCGACTTGACATCATGTAAAGCAAACACTGAAAAACTGGAACTTCATGTCTATGGAATCATATTCATAGTTGCTCTAAGTTTTTTGTTGCTCATAATCTACTGCTGCTCCGACCGAATTCTTATAATTAGGgagagaagacaaaaaaaatcaagagatGCAGCTGCTGCAAGTGCAAAGAGGACAGTGAAAGTGCGCCAAAGGTGGAAAGATGCAAAAAAGGCAGCTTTGAATCAAGCTAGTCGGATGCAATCCCACTTGTCTTTCACAAATTCTCGCAAACGGAATGAAACAAAATCAGAAGAACTTCAGATGTTGAGTATACCTGAgacacatgatgatgatgatgatgatgatgatgtgtTCTCATTTCCACATTCTAGTGCTTCAACTGCAACTGTGCACTCTCCAGTAGTATCAAGGTGGCAGCAAACTGAGCCAAGTCACCAAATGGAAAGAAggcaagaaattgaaaatgtagCTGTTGGTGATGATGGATATGATGTTGAAACTGGAAGcaatattattaaagaaaacaagtcaaaagggaaaaagctAAACAGTCGTAGCAAGATCTATAGGCATGCATATTCACGGCTTGAGAAGGAAAAGGCTCAGgaacaagaacaaaagaacCTTACTTTCACAGGAGTAGTTAACGTGGCTACCCACAGTGAACCACAAAAAAGGCCTCTAATTGAGATTTCTTTCAAAGATCTAAGTCTTACTTTAAAATCCCAGAACAAGTACATATTAAGAAGTGTTACAGGGACAATAAAACCTGGCCGCATTACTGCTGTCATGGGTCCATCTGGGGCTGGTAAAACAACATTTCTTTCAGCTATAGCAGGAAAGGCATTTGGATGCAGAATGACCGGTTCGATTCTTATCAATGGAAGGAATGAATCAATTCATTCTTACAAGAAAATTGTTGGTTTTGTGCCACAAGATGATATTGTTCATGGAAACCTTACAGTGGAAGAGAATGTCTGGTTCAGTGCAAAATGCAGGCTGTCCACTGGCTTGTCGAAAGCGGATAAAGTTGTGATTTTAGAAAGAGTTATTGAATACTTGGGGCTTCAGGCTGTGAGGAATTCTCTTGTTGGAACTGTAGAACAGCGAGGCATATCGGGAGGCCAAAGGAAGCGGGTAAATGTTGGATTGGAGATGGTCATGGAACCTTCACTCTTGATTTTGGATGAACCGACCTCTGGTTTGGACAGTGCATCATCTCAACTTCTTATTAGAGCACTTAGGCGCGAAGCTCTTGAGGGGGTGAACGTTTGCTTGGTGGTTCACCAACCCAGCCATACCTTGTTCAACATGTTTGATGATTTAGTACTCCTTGCAAAAGGTGGTCTAACTGTATATCATGGACCCATCAATGAAGTTGAAGGATACTTTGCTGCTCTCGGGATCGTTATTCCGGAGAGAATAAATCCTCCAGACTACTTTATTGACATTTTGGAGGGTATAGTGGTGCCTAATGGAAGCTCAGAAGTAAATTACATGGAGCTTCCAGTTAGATGGATGCTTCACAACGGGTACCCAGTACCTCCAGATATGCAACAGAATGAAGCAGCACTTGCCATGTCCTCAAGGGGTGAAAATCCCCTTGATGAAATAAATCATGTTGATGATACTACTGTGGAACAATCTTTCACTGGAGAGTTACTGAAAGATGTGAGGGGTAATATAAAGATGCATCATGAGAAGATAAGGCTAAATTTCTTGAAGTCCAAGGATTTATCGAATCGAAGAACTCCCAGTGTTTTCCTGCAATATAAATACTTCCTTGGAAGAGTCACTAAGCAGAGACTACGCGAAGCCAAAACACAAGGCATAGACTATCTGATTCTATTACTTGCCGGTGCCTGCCTAGGATCACTGGttaaaatgaaagatgaaTCATTTGGTGCAGATGGATACACATACACTGTGATTGCTGTTTctCTTCTTTGTAAAATAGCAGCTTTGAGATCATTTTCCCTTGATAAATTACAACACTGGAGGGAGAGTGCTTCTGGCATGAGCAGCTTGGCTTATTTTCTTGCTAAGGACACAATTGACCATTTTAATACAGTTATCAAGCCTGCAGTTTACCTGTCAATGTTCTATTATTTCACCAATCCAAGGTCTACATTTGTGGATAATTACACTGTGCTACTATGCCTTGTCTACTGTGTAACCGGCATCGGCTATCTCTTGGCCATCTTATTTGAACCCGGAGCAGCCCAACTGTGGTCAGTACTCCTTCCAGTTGTTGTGACTCTGATTGCGACGCGACGAAGAGATGGTGAATTTATACAGCGGATATCTAATTTATGCTACTCTAACTGGGCTCTGCAAGCATTTGTAATTGCAAATGCTAAAAGGTACAGTGGAGTGTGGCTCTTGAGTCGATGTGGCTTGCTTATGAAAAGTGATTATGATCTTAATGACTGGAATTGGTGCTTATCCATCCTAATCCTCTTTGGTGTAGTTAGTCGTGTAATAGCATTCTTCTGTATGCtaatatttcaaaagaagTG 3335 0.397 MKKLKLKAFSGFCCRILWLTVVILSSLRLVQCQQTSDLNQFNNSSLLKDHLANLTAVLSQEIKRKFSFCIKDPEAEWNQAFNFSSDTEFLSSCMLKSKGDISRRICTAAEVKFYSSTFSERIGKYLKPNRNCNSTSWVGGCEPGWACSSDQEVDINSEDIPTRTRNCQSCCDGFFCPEGLTCMIPCPLGSYCTNATLNETTGLCEPYLYQLPGNLPNHTCGGANIWADVRNGKEMFCPAGSYCPTTTKKHNCSSGHYCRMGSISEKRCFDLTSCKANTEKLELHVYGIIFIVALSFLLLIIYCCSDRILIIRERRQKKSRDAAAASAKRTVKVRQRWKDAKKAALNQASRMQSHLSFTNSRKRNETKSEELQMLSIPETHDDDDDDDDVFSFPHSSASTATVHSPVVSRWQQTEPSHQMERRQEIENVAVGDDGYDVETGSNIIKENKSKGKKLNSRSKIYRHAYSRLEKEKAQEQEQKNLTFTGVVNVATHSEPQKRPLIEISFKDLSLTLKSQNKYILRSVTGTIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCRMTGSILINGRNESIHSYKKIVGFVPQDDIVHGNLTVEENVWFSAKCRLSTGLSKADKVVILERVIEYLGLQAVRNSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLIRALRREALEGVNVCLVVHQPSHTLFNMFDDLVLLAKGGLTVYHGPINEVEGYFAALGIVIPERINPPDYFIDILEGIVVPNGSSEVNYMELPVRWMLHNGYPVPPDMQQNEAALAMSSRGENPLDEINHVDDTTVEQSFTGELLKDVRGNIKMHHEKIRLNFLKSKDLSNRRTPSVFLQYKYFLGRVTKQRLREAKTQGIDYLILLLAGACLGSLVKMKDESFGADGYTYTVIAVSLLCKIAALRSFSLDKLQHWRESASGMSSLAYFLAKDTIDHFNTVIKPAVYLSMFYYFTNPRSTFVDNYTVLLCLVYCVTGIGYLLAILFEPGAAQLWSVLLPVVVTLIATRRRDGEFIQRISNLCYSNWALQAFVIANAKRYSGVWLLSRCGLLMKSDYDLNDWNWCLSILILFGVVSRVIAFFCMLIFQKK 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01151 1111 MobiDBLite consensus disorder prediction 392 407 - -
Bva03g01151 1111 Pfam ABC-2 type transporter 701 1111 IPR043926 GO:0140359
Bva03g01151 1111 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 1108 - -
Bva03g01151 1111 MobiDBLite consensus disorder prediction 360 378 - -
Bva03g01151 1111 CDD ABCG_EPDR 501 727 - -
Bva03g01151 1111 Coils Coil 458 478 - -
Bva03g01151 1111 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 745 IPR003439 GO:0005524
Bva03g01151 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 740 IPR027417 -
Bva03g01151 1111 Gene3D - 489 740 IPR027417 -
Bva03g01151 1111 MobiDBLite consensus disorder prediction 347 407 - -
Bva03g01151 1111 ProSitePatterns ABC transporters family signature. 644 658 IPR017871 GO:0005524
Bva03g01151 1111 Pfam ABC transporter 520 672 IPR003439 GO:0005524
Bva03g01151 1111 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 34 1108 - -
Bva03g01151 1111 SMART AAA_5 529 721 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01151 Bva-Chr3 11125339 11135057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01151 498 704 Calmodulin-binding Proteins AT2G36910 28.302 1.29e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01151 - - lang:109341040 1461.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01151 03 11125339 11135057 Bva09g00274 09 1426632 1432502 ECH
Bva04g02561 04 22969150 22976123 Bva03g01151 03 11125339 11135057 ECH
Bva13g01971 13 15863776 15870640 Bva03g01151 03 11125339 11135057 ECH
Bva03g01151 03 11125339 11135057 Bva03g01151 03 11125339 11135057 ECH