Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01150 ATGCCTAAGTCTAAAATGAGCTCAAAGAGCTCGTGGAGTATTATTTGTTTACTACCCATTGTGGTTTTGAGCTTGTTTCTGTTGGTAAAGTGCCAAGAAGTGAATGACTATGACCAAATTGACAACCCTGCTGTTCTTCCCCTTATTACCCAGCTTGTATATAGCAGACTTTCCAATTTGACCTCAATTCTCAGTAAGGAAATCAGCGGCCAGTCCAGTTTCTGCGTCATTGATCCggaAGATGACTGGAACcaagcatttaatttttcatctgATTTGGGATTCTTGACTTCTTGTATTCAGAAGACTAAAGGAGATATTACAAGACGCTTGTGTACAGCAGCAGAGATTAAGTTTTACTTCACAAGTTTTTTTGACAGATCTACAACAGcaaattatttgaagccaAACAAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGTGAGCCAGGCTGGGCCTGTAGTGTTGGTCCAAGCCAGAAAGTTGaccttcaaaattcaaaggaAATCCCTTCAAGAACTACAAATTGTCATGCATGTTGTGAGGGCTTCTTCTGCCCACATGGATTAACTTGCATGATACCCTGCCCGTTAGGTTCCTATTGCCCTCTTGCAACACTCAACAGAACAACTGGTGTTTGTGAACCATATCTTTACCAACTACCTCCAATGCAGCCAAATCACACGTGTGGAGGAGCAAATATTTGGGCTGATGTTAGTAGCAGTAGTGAGTTGTTTTGTTCAGCAGGATATTATTGTCCAACCACcacaaaaaaaatccattgtAGCAAGGGACATTACTGCAGGATGGGTTCTACATCTGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACGGAAACTCagaacatgcatgcatatggAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAGTGGCCAAATCCAGAGAAGCTGCAGCTAGAAGTGTCAGGAAGACTGCAAATGCACGTCAAAGATGGAAGTCTGCAAAAGATGCTGCTAAGAAGCATGCAAGTGGGTTGCAAGCTCAATTGTCGCACACATTTTCCCGTAAGAAGGATGCAACAGATTcagaaaaacttaaaattttgaatcaagCAACTTCTTCTGAAACAGATGTTGAACTGTTGCCACCTTCACCTTCTATTACTACAAATATGACCATGATTTCATCAGCATTTCCAAAGCATAAGGGAAAAGAGCCCAGCAACCTGATGGAGATGATccatgaaattgaaaatgaccCAGATATCAATGATGATTTGCATGAGGATACTACAGCTATAGAAACTAGAGATAAAACCGTTGCAAAGAATATGCCCAAGGGAAAACAACTCAATACTCATAGccaaatttttaagtatgCATATGCTCAGCTCGAAAAGGAGAAGGCTCAGcaacaagaaaacaagaacCTCACCTTCTCTGGTGTAATTAGAATGGCTACCAACAATGAACAAAGGAAGAGGCCTTTAATTGAGATTTCTTTCAAAGATCTCACTCTTACTTTGAAAGcaaaaaacaaacatatattGAGATGTGTCACAGGGAAAATCAAACCTGGTCGCATCACTGCAGTGATGGGTCCATCTGGAGCTGGCAAGACAACATTTCTTTCAGCTCTTGCTGGAAAAGTATTTGGATGCAGAATGTCTGGCTTAATTCTTATAAATGGAAAGAATGAATCAATTCACTcgtataagaaaattattggcTTTGTGCCACAAGATGATATAGTTCATGGAACTCTGACAGTGGAAGAGAATCTTTGGTTCAGTGCACAGTGCAGGCTGTCTGCTGATTTGTCAAAACCGGATAAAGTTCTCGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGACAGTACGGAATTCTTTAGTTGGAACTGTAGAAAAGAGAGGGATCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGACTGGAGATGGTCATGGAACCCTCACTTTTGATCTTGGATGAACCTACATCGGGTTTGGACAGTGCATCATCTCAGCTCCTTCTTAGAGCACTTAGACGTGAAGCTCTTGAGGGGGTGAACATCTGCATGGTTGTTCACCAACCCAgCTATGCCTTGTATAAGATGTTTGATGACTTGATACTTCTGGGAAAAGGTGGTCTTACTGTCTATCATGGATCAGCCAAGAAAGTTGAAGAATACTTTGCAGGCCTAGGGATTAACATCCCAGAGAGGATAAATCCTCCAGACTACTTCATTGACATTTTGGAGGGTCTAACTGCACTGAATGGAAGCTcggtaataaattataaagagcTGCCTTTAAGATGGATGGTTCATAATGGATACCCAATACCTCTTGATATGCAGCAAAGTGCCGCAAACTTTAATATGTCCACCTCAAGTACAAATCCAACTCACGAAATGGATCCTGATGGTTCTGGTCATGAGGAAAACTCTTTTGCTAGAGAATTATGGCAGGACATGAAACATAATGTGGAACTTCAGAGGGAAAAGATCCGACTCAACTTTTTGAAGTCTAAAGATTTATCTAACAGGAAAACTCCTGGTTTGTTCAAGCAATATAAGTACTTCCTTATAAGGGTTGGTAAGCAGCGATTACGGGAAGCAAGGATTCAAGCCATagattatctaatattattacTTGCCGGAGCTTGCTTAGGAACACTTACCAAGAGAAGCGATCAAACGTTTGGTGCTGCTGGCTACACTTATACAGTGATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTTTCTCTGGACAAGTTACAGCACTGGAGGGAGAGTGATTGTGGCATGAGCAGCTTggcttattttctttcaaaagacACAATTGATCATTTTAATACAGTGATCAAGCCTGTGGTGTACCTCTCCATGTTCTATTTCTTCACCAATCCAAGATCTACGTTTGCAGATAATTATGTTGTACTGCTTTGTCTTGTATACTGTGTTACGGGCATAGCATATGCATTGGCCATATTCTTTGAACCTGGTGCGGCGCAATTATGGTCAGTACTTCTTCCAGTTGTTATGACACTCATCGCCACACAACCGAAAGACAGTAAATTTGTGAAGGAGGCAGCAAATTTATGCTATACCAAGTGGGCTTTGCAAGCATTTGTAATTGCAAATGCTGAAAGGTACCACGGAGTATGGCTGATAACGCGGTGTGGTTCACTTTTGAAAAGTGGGTATAACCTTCATGATTGGAGCTTGTGCATATTTATCCTCATTCTTATTGGTGTAATTAGTCGAGTAATAGCGTTTTTCTGCTTGGTCACCTTCCGGAAGAAGTG 3374 0.3841 MPKSKMSSKSSWSIICLLPIVVLSLFLLVKCQEVNDYDQIDNPAVLPLITQLVYSRLSNLTSILSKEISGQSSFCVIDPEDDWNQAFNFSSDLGFLTSCIQKTKGDITRRLCTAAEIKFYFTSFFDRSTTANYLKPNKNCNLTSWVSGCEPGWACSVGPSQKVDLQNSKEIPSRTTNCHACCEGFFCPHGLTCMIPCPLGSYCPLATLNRTTGVCEPYLYQLPPMQPNHTCGGANIWADVSSSSELFCSAGYYCPTTTKKIHCSKGHYCRMGSTSEKRCFKLSSCNSNTETQNMHAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSVRKTANARQRWKSAKDAAKKHASGLQAQLSHTFSRKKDATDSEKLKILNQATSSETDVELLPPSPSITTNMTMISSAFPKHKGKEPSNLMEMIHEIENDPDINDDLHEDTTAIETRDKTVAKNMPKGKQLNTHSQIFKYAYAQLEKEKAQQQENKNLTFSGVIRMATNNEQRKRPLIEISFKDLTLTLKAKNKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKVFGCRMSGLILINGKNESIHSYKKIIGFVPQDDIVHGTLTVEENLWFSAQCRLSADLSKPDKVLVVERVIEFLGLQTVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALYKMFDDLILLGKGGLTVYHGSAKKVEEYFAGLGINIPERINPPDYFIDILEGLTALNGSSVINYKELPLRWMVHNGYPIPLDMQQSAANFNMSTSSTNPTHEMDPDGSGHEENSFARELWQDMKHNVELQREKIRLNFLKSKDLSNRKTPGLFKQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGTLTKRSDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLQHWRESDCGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYVVLLCLVYCVTGIAYALAIFFEPGAAQLWSVLLPVVMTLIATQPKDSKFVKEAANLCYTKWALQAFVIANAERYHGVWLITRCGSLLKSGYNLHDWSLCIFILILIGVISRVIAFFCLVTFRKK 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01150 1124 Pfam ABC-2 type transporter 714 1124 IPR043926 GO:0140359
Bva03g01150 1124 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 38 1120 - -
Bva03g01150 1124 MobiDBLite consensus disorder prediction 331 378 - -
Bva03g01150 1124 Pfam ABC transporter 535 685 IPR003439 GO:0005524
Bva03g01150 1124 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 516 758 IPR003439 GO:0005524
Bva03g01150 1124 ProSitePatterns ABC transporters family signature. 657 671 IPR017871 GO:0005524
Bva03g01150 1124 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 1120 - -
Bva03g01150 1124 Gene3D - 501 753 IPR027417 -
Bva03g01150 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 516 748 IPR027417 -
Bva03g01150 1124 SMART AAA_5 542 734 IPR003593 -
Bva03g01150 1124 CDD ABCG_EPDR 514 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01150 Bva-Chr3 11111644 11121442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01150 540 735 Calmodulin-binding Proteins AT2G36910 26.977 2.93e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01150 - - gmx:100775464 1825.45