Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01126 ATGTGCGGTTCCAAAAAGAGCACGGACGTGATCGAATCCCACAGCCACCGTGCCAGCACCCCTCGAACCCCAAAATCTCCTTCACCACAACAACAACCTCTTCCCgatctttcttcttccagCAACATTTTCCTCACTGATTCAAGAAGCAACAACAAGTATTGGTCCAAATCCTCTGCTTCAAGTTGCAGCTCTCTCGCTAGCCTCAAGGATTCCTTGCCGGAAAATCCCCACATTTACAACTTCTCCGATATCCGCTCCGCCACCTCTAATTTTCTCTCCGATAagttttccttctcttcctcGTCCAGCTCTTGGCGATGTATTATTCGGAACAAGGACGTTGTCGTCTTTCAGCGCAAGCTTCGCCGCCCATTAGAGTTGTCGGAGCTCCGGGAAAGACTAGCGGTGATTTGCCGGAGCCACCATAATAGCTTGGTCAAATTGCTTGGGGCATCGATCTCCGGGAACTACATTTACCTTGTGTATGAGTATGTTCACGGTGTGAGTCTTGGGGATTGTCTTCGTAATCGAAGGAATCCCAATTTCACCGTGCTATCTTGGCTTTCCAGGATGCAAATCGCTACCGATATCGCTCATGGGCTTGATTACATCCACCATTTCTCAGGTCTGAACTCGAATTTCATCCACAACCATATCAAGAGCTCCAGTATCATCGTCACGGAGAATTTGAATTCGAGAATTTGCCATTTTGGGACCTCGGAATTGTGCGGGGAGGTAGTTGGGGAAGGTTCGTCTGGCTCTTTTTCTGCGAGACTCAAGGAGCTGAAAAGATTCGGTAGCCAAGTAACGAAAGTCGCCGGAACGAGAGGGTATATGGCGCCGGAAATTCAGATCACAGGCGTTGCGACGCAAAAGTCCGATGTGTATGCTTTCGGTGTAGTCACTTTGGAGCTTCTGAGCGGAGAAGAGGCGTTGAAACACGAATTTGACGACGGCACCAGTAGTGGATACAGAAAAGTGAGTGTGGTGGCGACGGCAAGACGGGCTCTGGAAGAAGACGGTGGTGTGAGGAAATGGGTGGATAAGAGGCTGAAGGATTCGTTTCCGGTGGAGGTGGCCGAGAAGATGATCCAAATCGGGTTGGAGTGCATGGAGGAGGACCCGAATGAGAGGCTAGATATGGGTCGGGTGGCTGTTTCGGTGTCCAAGTTGTTTTTGGAGTCTCAGAAGTGGGCTGAGAAGATGGGGACTCCTATTGACTTCTCGTTCTCAATGGCGCCACGGTG 1250 0.4896 MCGSKKSTDVIESHSHRASTPRTPKSPSPQQQPLPDLSSSSNIFLTDSRSNNKYWSKSSASSCSSLASLKDSLPENPHIYNFSDIRSATSNFLSDKFSFSSSSSSWRCIIRNKDVVVFQRKLRRPLELSELRERLAVICRSHHNSLVKLLGASISGNYIYLVYEYVHGVSLGDCLRNRRNPNFTVLSWLSRMQIATDIAHGLDYIHHFSGLNSNFIHNHIKSSSIIVTENLNSRICHFGTSELCGEVVGEGSSGSFSARLKELKRFGSQVTKVAGTRGYMAPEIQITGVATQKSDVYAFGVVTLELLSGEEALKHEFDDGTSSGYRKVSVVATARRALEEDGGVRKWVDKRLKDSFPVEVAEKMIQIGLECMEEDPNERLDMGRVAVSVSKLFLESQKWAEKMGTPIDFSFSMAPR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01126 416 Pfam Protein kinase domain 130 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01126 416 SUPERFAMILY Protein kinase-like (PK-like) 106 389 IPR011009 -
Bva03g01126 416 PANTHER OS09G0572100 PROTEIN 1 416 - -
Bva03g01126 416 MobiDBLite consensus disorder prediction 1 42 - -
Bva03g01126 416 ProSiteProfiles Protein kinase domain profile. 91 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g01126 416 Gene3D Transferase(Phosphotransferase) domain 1 167 406 - -
Bva03g01126 416 PANTHER OS09G0572100 PROTEIN 1 416 - -
Bva03g01126 416 Gene3D Phosphorylase Kinase; domain 1 51 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01126 Bva-Chr3 10647282 10648950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01126 75 399 Receptor kinase-like Gene Family AT1G51940 31.928 1.74e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva03g01126 Pkinase 5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01126 - - zju:107405265 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01126 03 10647282 10648950 Bva09g00271 09 1413037 1414910 ECH
Bva03g01126 03 10647282 10648950 Bva03g01126 03 10647282 10648950 ECH