Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01120 ATGGGTAATGTTGAAATTCCTAATTGGCTCAAGCGACTGCCATTGGCACCAGAATTTCGACCTACTGAAACTGAATTCGCCGACCCTATTGCATATATCTCAAAGATTGAGAAGGAAGCTAGCGCTTTTGGTATTTGCAAGATTATCCCACCATTACCGAAACCTTCAAAAAGATATgttttttctaatttgaatAAATCACTTTTGAAGTGCCCAGAATTGGgttcaaatataatttcttctgGCGTTTGTAATTCTTTGAAAATGAATTCTGGGGATACTGGCAGTGATAGGGTGTTGCGAGCTGTGTTCACTACCAGGCAGCAGGAATTGGGGCAGAGcatgaagaaaaccaaagaaagagTCCAAAATCCACTGTCAAGTGTTCATAAGCAAGTATGGCAAAGTGGAGAGGTTTATACACTGGAGCAGTTTGAGTCTAAATCAAAGGCTTTTGCAAGAAGTGTACTAGGGATGGTTAAGGAGGTTTCTCCTCTGGTTATAGAGGCTATGTTTTGGAAGACAGCTTCAGAGAAGCCTATATATGTGGAGTATGCCAATGATGTGCCTGGGTCTGCTTTTGGGGAATCGAATGGTCAATCTCGTTATATTCACaaacagagaagaagaaaaggttaTTATAAGAGAAGTCTAGCTAGTTCTGATTGCAAGAAAACTGAAATGGATAACATTAGAGATGCCAAAGCTGATGAGAATAACGATACTTCTGCCAAAAATCAAGCAGATACATGTTTACAAACAGCTATGTCAACTGCAGCTCTGTCAACATTATCATCAAATGAAGGTTCACATTCTTCTTGTCAAAAGAGTTCAGATGCCAGTAATGAGATAGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTACAAGTTATTGCACGGTCACCTGGCTCACTAACACGGTTCATGCCAGATGATATTCCCGGTGTTACTTCCCCTATGATATACATTGGGATGTTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAGCTTCATAGCTTGAATTTTCTACACACTGGCTCACCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTTTACTTTTGAAGAAGTCATCCGCTCTGAGGCATATGGTGGTAATATTGACCACTTAGCTGCACTTACACTTTTGGGAGAGAAGACAACACTTCTCTCACCTGAGGTAGTTGTTATGTCTGGGATTCCTTGTTGCAGGTTAATACAGAAACCTGGTGAATTTGTTGTGACTTTTCCAAGGGCCTATCATGTAGGATTCAGCCatgGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTACAGTAGCCAAGGAAGCTGCAGTCAGAAGGGCTGCTATGAATTATCTTCCCATGCTCTCCCATCAGCAACTGCTTTACTTGTTGACAATGTCTTTCATTGCAAGAGTGCCAAGGTCGTTATTACCAGGTGTGCGGAGTTCTCGTCTGAGAGATCgtcagaaagaagaaaaagagttatTAGTGAAAAAGGCTTTTATAGAAGACATGCTGCATGAAAATAATCTGCTATCCATTCTCCTTGAAAAGGGATCAGCTCATCATGCTGTTTTGTGGAATGCTGACTTACTGCCAGATTATAGCAAACATTCTCAGATGCCTGATTTGGCTTCTACTTTTGAAACTTCTATGGTGGACATGTCAAATATTAGTTCTGCAGATAATAGTAGTGATGGTTATCTGTTTGAAGAGATATTGTCTATGGAGAATCTGACTAATTTATGTCTGGATGATGATGATCTCCCATGTCACTTCCAGACTGATTCAGGGGCATTGGCCTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTAATGACTGTGGTACAACCATCTGAGAGATCATTAATGGAACTTCTACCTGCTAATCATCATCTACCTCCAGATTCCTCACCAGACCTTAATTCCTCCATGCATGGCTCTGTTTCCAGCAAAGGAAATCTCTCTGTTTCTGATATTTCTTCAGCAAAGGAACTACCAAAACCATCATTGATGAAGTTTGACAGAGGTCAGAATCCCTCTAGTACACTTTTTAGGCCAAGGATCTTCTGCCTGGAGCATGCTCTTCAGATTGTGGACATGTTGCAGGGTAAAGGTGGAGCCAAGGTGCTTGTTATTTGCCACTCAGaCTATCAGAAAATAAAGGCTCATGTCAGAGCAGTTGCAGAGGAAATAGGTAGTGCTTTTGATTATAATGAAGTTCCATTAGATATTGCATCCCCAGAAGATTTGACTCTGATTGATTTGGCAATTGATGGTGAAGAACTTGATGAAAGTGAAGACTGGACATCTAAACTAGGTATCAACCTACAGCATTGTGTCAGAGCAAGAAAGAACTTACCATCTAAACAAGTTCCTTATGCACTGGCGTTGGGGATGTTGTTCTCTGATAAAGCTCATAGTTCAGAATTCTTATCTATAAAATGGCAGTCACGGAGATCTCGCTCCAAAAGGTTAAAACATTTAGGCCAGGCTAAAGCACACAACAGCGCTCAGACAAAGAAGGACGACCAATTGCAGGGAAGAATAGAATTAACAAGTGGCTCCGTTgctaaaaatgaaattctatttCACTATTCACGGAGAAAGTTCAAGTCAAAGCAGGCTTGTGTCCCTGGAAAAAGCTCTGCGGAAGAATGTTGTGGTGGTCtcaaaaagaattatgttGATGAAAGCAGTAGCAAAGCTATGTCCTTTAAAGAGACAACTGAGCTAGAAATTATTACTTCGAATAGAAGTGAAGAGGAACCTAATCCCAGCCATGATAAACCAATAAATGAGCATACTCCGAATGGAGAAGGCTTTGAAGTTCCAATAGAGCTTTCTGCTGCAGACTTGTATGATCCTGTACCACTGGCTGCTGAATTGCATGAGGATGCGCAAATTGTAGAAGGTAACAATAGGGAAATAAATCCATGTTCTCATCTTCCAGTGGAACGAAGGTGTGAATATCCTAGAAGGGAACATGCCGAAGTCTTAGATGAAGTGATTTCGGACTCTGAAAAGCAGCATCAGGACCAGAACGAGAATAAAATTGGTGAGGAACCTGCTCCTAGTTATGTTCCAAAAGGGGAACCCAAAAGTTTGTCCATCTCAAAAGTAATATGTTCCAAGGTTTCACGGGAAGCCTGTCCCAAAGGAGAATCAATTactcaatttatttcatatagaAGAAGAGAACCAGAAATTCAGCCAAAAAGGATAAATGATGAAGAACTGTGCTCTGGGACTGAGACTTCACTAATGGAGTCTTCTGTCTCATTCCAAGAATGTTCTGCAATTGAGAAAGAAGCATGTCATAcagaaaaaaatggaactGAAGTTAATTTGTCGCGAGGTAAAAGGGAGGTTGGAGGCTCTGAGTTGGCCACACCAGCCCCCAGCTCAAATtctgagaaaaagagaaagcggGAAGCGGAGTGGATCACAAAGGACAGTTTCAGCAGCTATGGCTTTTCTCGAAGTCCATGTGAAGGATTGAGGCCAAGGGCAGGGAAGGTAGCCAGAGATAAAAGCACCAATGCTGTCAAGGAGACTCTGGAGCCAAAAATGGCAAGAAAACATCCTGACGTTCTGGTTTCtcacaagaataaaaaggtTGTCAAGGGGTCTCACAAGTGTGACATTGATGGTTGTCGTATGAGTTTTAAGACCAAAGCAGAGTTGAAGTTGCACAAACGCAACCGTTGCCCACATGAAGGGTGTGGAAAGAAGTTCAGCTCGCACAAATATGCTATGATTCACCAGCGTGTTCATGATGATGAGAGGCCCTTCAAGTGCCCTTGGGAAGGTTGCTCCATGTCATTCAAGTGGGCATGGGCTAGGACAGAGCATATACGGGTTCATACCGGGGAGAAGCCATATCATTGCAAGGTTGAGGGATGTGGCCTTTCTTTCAGGTTTGTATCAGATTATAGCAGACACAGAAGGAAAATGAGGCACTATGTTAAGTA 4013 0.4032 MGNVEIPNWLKRLPLAPEFRPTETEFADPIAYISKIEKEASAFGICKIIPPLPKPSKRYVFSNLNKSLLKCPELGSNIISSGVCNSLKMNSGDTGSDRVLRAVFTTRQQELGQSMKKTKERVQNPLSSVHKQVWQSGEVYTLEQFESKSKAFARSVLGMVKEVSPLVIEAMFWKTASEKPIYVEYANDVPGSAFGESNGQSRYIHKQRRRKGYYKRSLASSDCKKTEMDNIRDAKADENNDTSAKNQADTCLQTAMSTAALSTLSSNEGSHSSCQKSSDASNEIEGTAGWKLSNSPWNLQVIARSPGSLTRFMPDDIPGVTSPMIYIGMLFSWFAWHVEDHELHSLNFLHTGSPKTWYAVPGDYAFTFEEVIRSEAYGGNIDHLAALTLLGEKTTLLSPEVVVMSGIPCCRLIQKPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFIARVPRSLLPGVRSSRLRDRQKEEKELLVKKAFIEDMLHENNLLSILLEKGSAHHAVLWNADLLPDYSKHSQMPDLASTFETSMVDMSNISSADNSSDGYLFEEILSMENLTNLCLDDDDLPCHFQTDSGALACVGCGILGFPLMTVVQPSERSLMELLPANHHLPPDSSPDLNSSMHGSVSSKGNLSVSDISSAKELPKPSLMKFDRGQNPSSTLFRPRIFCLEHALQIVDMLQGKGGAKVLVICHSDYQKIKAHVRAVAEEIGSAFDYNEVPLDIASPEDLTLIDLAIDGEELDESEDWTSKLGINLQHCVRARKNLPSKQVPYALALGMLFSDKAHSSEFLSIKWQSRRSRSKRLKHLGQAKAHNSAQTKKDDQLQGRIELTSGSVAKNEILFHYSRRKFKSKQACVPGKSSAEECCGGLKKNYVDESSSKAMSFKETTELEIITSNRSEEEPNPSHDKPINEHTPNGEGFEVPIELSAADLYDPVPLAAELHEDAQIVEGNNREINPCSHLPVERRCEYPRREHAEVLDEVISDSEKQHQDQNENKIGEEPAPSYVPKGEPKSLSISKVICSKVSREACPKGESITQFISYRRREPEIQPKRINDEELCSGTETSLMESSVSFQECSAIEKEACHTEKNGTEVNLSRGKREVGGSELATPAPSSNSEKKRKREAEWITKDSFSSYGFSRSPCEGLRPRAGKVARDKSTNAVKETLEPKMARKHPDVLVSHKNKKVVKGSHKCDIDGCRMSFKTKAELKLHKRNRCPHEGCGKKFSSHKYAMIHQRVHDDERPFKCPWEGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDYSRHRRKMRHYVK 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01120 1337 PANTHER LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED 1 1329 - -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 642 669 - -
Bva03g01120 1337 Gene3D Cupin 9 464 - -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 1122 1158 - -
Bva03g01120 1337 SUPERFAMILY beta-beta-alpha zinc fingers 1266 1306 IPR036236 -
Bva03g01120 1337 ProSiteProfiles Zinc finger C2H2 type domain profile. 1248 1277 IPR013087 -
Bva03g01120 1337 Pfam JmjC domain, hydroxylase 325 443 IPR003347 -
Bva03g01120 1337 SUPERFAMILY Clavaminate synthase-like 292 458 - -
Bva03g01120 1337 SMART JmjN_1 15 55 IPR003349 -
Bva03g01120 1337 ProSitePatterns Zinc finger C2H2 type domain signature. 1310 1334 IPR013087 -
Bva03g01120 1337 ProSitePatterns Zinc finger C2H2 type domain signature. 1250 1272 IPR013087 -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 838 860 - -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 929 955 - -
Bva03g01120 1337 Gene3D Classic Zinc Finger 1249 1275 - -
Bva03g01120 1337 SUPERFAMILY beta-beta-alpha zinc fingers 1296 1330 IPR036236 -
Bva03g01120 1337 ProSiteProfiles Zinc finger C2H2 type domain profile. 1278 1307 IPR013087 -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 929 949 - -
Bva03g01120 1337 SMART cupin_9 291 460 IPR003347 -
Bva03g01120 1337 Gene3D Classic Zinc Finger 1276 1303 - -
Bva03g01120 1337 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 1329 - -
Bva03g01120 1337 Gene3D Classic Zinc Finger 1304 1334 - -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 1015 1046 - -
Bva03g01120 1337 SMART c2h2final6 1225 1247 IPR013087 -
Bva03g01120 1337 SMART c2h2final6 1278 1302 IPR013087 -
Bva03g01120 1337 SMART c2h2final6 1308 1334 IPR013087 -
Bva03g01120 1337 SMART c2h2final6 1248 1272 IPR013087 -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 1015 1031 - -
Bva03g01120 1337 Pfam jmjN domain 17 50 IPR003349 -
Bva03g01120 1337 MobiDBLite consensus disorder prediction 649 669 - -
Bva03g01120 1337 ProSiteProfiles Zinc finger C2H2 type domain profile. 1308 1337 IPR013087 -
Bva03g01120 1337 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Bva03g01120 1337 ProSiteProfiles JmjC domain profile. 294 460 IPR003347 -
Bva03g01120 1337 ProSitePatterns Zinc finger C2H2 type domain signature. 1280 1302 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01120 Bva-Chr3 10525758 10534182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01120 1 883 C2H2 Transcription Factor Family AT5G04240 57.572 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva03g01120 JmjC 1.4e-35 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01120 - - adu:107467970 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01120 03 10525758 10534182 Bva03g01120 03 10525758 10534182 ECH