Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01117 atgGCTCTAAACGTGATCAAGATAAAGGGTAAACTTCTCAAAAACTGCTTTTGGGAACTCTGGAAATTCAAAAGAGCAAGCGCCACTGCTCTTAATTCTGCAGTTTTCGACCATTTTGGTAAATGGGTTAGATGCTGTTACTTTCATCAGGAGGCAATGGCATATGTTCCCAGAGATGTCCCAAAAGGTCACTTTGTAGTCTATGTGGGAGAACACTGCAAGAGATTCGTCATCGAGGTAACCGTACTCAATCATCCACTCTTCGAAGCCTTGCTTGATCATGCAGAAGATGTATTTGGATTCACCAATGCTTCAAAACTCCACATTCCTTGCCATGAGACCATTTTCCTAAGCATTCTTCACAACGCTGCAGCTTCTGTACAAGAACAAAGGTTCTTACCATGTTTCTA 410 0.4171 MALNVIKIKGKLLKNCFWELWKFKRASATALNSAVFDHFGKWVRCCYFHQEAMAYVPRDVPKGHFVVYVGEHCKRFVIEVTVLNHPLFEALLDHAEDVFGFTNASKLHIPCHETIFLSILHNAAASVQEQRFLPCF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01117 136 Pfam Auxin responsive protein 54 120 IPR003676 GO:0009733
Bva03g01117 136 PANTHER SMALL AUXIN-UP RNA-RELATED 4 136 - -
Bva03g01117 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01117 Bva-Chr3 10488381 10488791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01117 59 120 Calmodulin-binding Proteins AT4G34750 48.387 1.08e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01117 K14488 - rcn:112189246 121.709