Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01080 ATGTCAAGTTTTCATGTGGGTGGCAAGGTGGTGGATAGGGTTGATTTGTTGAGGAAGAAGGAATGGCCATGGCGCTTGGATGTTTGGCCTTTTGCTATTTCATATCTTACCTGGATAGCTACAATCCTTCCTAGCTTAGATTTTGTGGATGCAGCCATAGTTTTGGGTGGGCTTGTAGCTCTTCACATTCTGGTTTGGCTGTTCACCAGTTGGTCAGTCGATTTTAGATGTTTCGCCCATTATAGTAAGGTTAAAAGCATTCATGATGCAAATGCATGCAAGATAACCCCAGCGAAGTTTTCAGGCTCTAAAGAGGTGGTCCCACTCAATTTCCATAAAACACCTGTAGGTTCTTCATCTCCTTCGGATTTGGAAGAAATTTACTttgattttagaaaacaaCGATTTGTCTATTCAAAGGAGAATGGGACGTTTTGCAAGCTTCCTTACCCTACCAAGGAAACATTTGGATATTATCTCAAATCCACTGGCTATGGCACTGAAGCTAAAGTTCACGCTGCCACTGAGAAATGGGGACGGAATGTATTTGATTATCCAAAACCTACATTTCAGAAATTGATGAAGGAGCACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTTTGTGTGGGCCTTTGGTGCTTGGATGAATATTGGTATTACAGTTTGTTTACTCTATTTATGCTGTTTATGTTTGAGTCCACAATGGCAAAAAGTCAGTTGAAGACTCTTACTGAGTTAAGACGTGTTAGAGTAGATAGCCAGATCCTAATGGTGTACCGATGTGGCAAGTGGGTAAAACTCTCTGGTACGGATCTTTTGCCTGGGGATGTTGTCTCTATAGGTCGCTCTTCAGGCCAAAGTGAAGGGGAAGAGAAGTCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCTATTGTGAACGAAGCCATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTTTCAATCATGGGAAGGGGCATTGAGGAGAAGTTGTCTGCCAGGCGAGATAAAACCCATGTCTTATTTGGTGGCACTAAAATATTGCAGCATACTCCAGATAAGTCCTTCCCACTCAAAACTCCTGATGGTGGTTGCGTAGCCGTTGTCCTAAGAACGGGGTTTGAAACCAGTCAGGGGAAGTTGATGCGAACAATATTATTCTCTACTGAGAGGGTGACTGCTAACAGCTGGGAAAGTGGGCTATTCATATTATTCTTGGTTGTATTTGCTCTAATTGCTGCTGGTTATGTACTTATAAAGGGGCTAGAAGATCCTACAAGAAGCAAGTATAAGCTTATTCTAAGTTGTTCACTTATTATTACATCTGTGATCCCTCCTGAGTTACCAATGGAATTGTCGATAGCTGTTAATACTTCCTTGATTGCACTGGCACGCCGTGGAATTTTTTGCACAGAGCCTTTCCGAATTCCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGTACACTTACATCCGATGACATGGAGTTCTCGGGAGTTGTTGGGTTAGCAGGGACTACTGATTTAGAAACTGATATCAGCAGAGTGCCTGCACGTACAGTTGAAATTCTTGCTTCTTGTCATGCCTTGGTGTTGGTTGACAATAAGTTGGTTGGTGATCCTCTAGAAAAGGCTGCTCTTAAGGGAATTGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCAAAAAGGGGAAATGGCCATCCCGTCCAAATTGTTCAGCGCTACCATTTTGCATCTCACTTAAAACGGATGGCTGTTGTTGTTCGCATTGAGGAAGAGTTTCTTACCTTCGTGAAGggTGCCCCGGAAATTATTCAAGATAGGCTAGCTGACTTACCTCCATCTTACGTTGAGACCTACAAGAAATATACACGTCAGGGCTCTCGTGTTCTTGCCCTTGCTTACAAGTCTCTTCCAGATATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGACATTGTGGAGAGTGGACTTACTTTTGCTGGTTTTGTGgTATTTAATTGCCCTATTAGATCAGATTCGGCCACAGTTTTATCTGAGTTGAAAGGATCATCTCATGACTTGGTAATGATTACTGGAGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGttcatataatatcaaaacctACATTAATCCTTGGTCCTGCAAGTAATGGTGAAGGATATAATTGGATTTCTCCAGATGAGACAGAGATAATTCACTACAGTGAGAAAGACGTTGAAATTTTATCAGAGACGCATGATCTCTGTATTGGAGGTGATTGCATTGAGATGCTGCAACAGACATTCGCTGCTCTTCTAGTCATTCCTCATGTGAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAGGAACTCATCATGACCACTTTCAAAACAGTTGGTAGGGTAACTCTGATGTGTGGGGATGGAACCAACGATGTTGGTGCTTTAAAGCAGGCTCATGTAGGAGTTGCTCTTCTGAATGCATTACCCCCAACTCAGAGCGCAAACCCCTCTTCAGACACTTCTAAGGAGGGTGCAAAGTCCGTCAAGCCAAAGAAGCCTAAGACTGCACCTGAAGCATCTGGAAAATCTAATAGTGCGCCTGGAGAAGGCACTTCAAAAGCCAAGGTTGCTTCAAGATCAGATTCCCCAGCAACTCATCCAGTAATCGTCATATG 2690 0.4253 MSSFHVGGKVVDRVDLLRKKEWPWRLDVWPFAISYLTWIATILPSLDFVDAAIVLGGLVALHILVWLFTSWSVDFRCFAHYSKVKSIHDANACKITPAKFSGSKEVVPLNFHKTPVGSSSPSDLEEIYFDFRKQRFVYSKENGTFCKLPYPTKETFGYYLKSTGYGTEAKVHAATEKWGRNVFDYPKPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSQLKTLTELRRVRVDSQILMVYRCGKWVKLSGTDLLPGDVVSIGRSSGQSEGEEKSVPADMLILAGSAIVNEAILTGESTPQWKVSIMGRGIEEKLSARRDKTHVLFGGTKILQHTPDKSFPLKTPDGGCVAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLAGTTDLETDISRVPARTVEILASCHALVLVDNKLVGDPLEKAALKGIDWSYKSDEKAVPKRGNGHPVQIVQRYHFASHLKRMAVVVRIEEEFLTFVKGAPEIIQDRLADLPPSYVETYKKYTRQGSRVLALAYKSLPDMTVSEARSLDRDIVESGLTFAGFVVFNCPIRSDSATVLSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILGPASNGEGYNWISPDETEIIHYSEKDVEILSETHDLCIGGDCIEMLQQTFAALLVIPHVKVFARVAPEQKELIMTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNALPPTQSANPSSDTSKEGAKSVKPKKPKTAPEASGKSNSAPGEGTSKAKVASRSDSPATHPVIVI 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01080 896 SFLD p-type atpase 470 844 IPR044492 -
Bva03g01080 896 Pfam haloacid dehalogenase-like hydrolase 486 714 - -
Bva03g01080 896 Gene3D - 226 389 - -
Bva03g01080 896 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 679 IPR023299 GO:0000166
Bva03g01080 896 PRINTS P-type cation-transporting ATPase superfamily signature 309 323 - -
Bva03g01080 896 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Bva03g01080 896 PRINTS P-type cation-transporting ATPase superfamily signature 691 701 - -
Bva03g01080 896 PRINTS P-type cation-transporting ATPase superfamily signature 810 829 - -
Bva03g01080 896 MobiDBLite consensus disorder prediction 834 896 - -
Bva03g01080 896 ProSitePatterns Hypothetical cof family signature 2. 810 832 - -
Bva03g01080 896 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 483 IPR023298 -
Bva03g01080 896 SUPERFAMILY Calcium ATPase, transduction domain A 255 388 IPR008250 -
Bva03g01080 896 MobiDBLite consensus disorder prediction 863 884 - -
Bva03g01080 896 PANTHER CATION-TRANSPORTING ATPASE 1 852 - -
Bva03g01080 896 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 40 848 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Bva03g01080 896 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 852 - -
Bva03g01080 896 Gene3D - 485 669 IPR023299 GO:0000166
Bva03g01080 896 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Bva03g01080 896 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 780 829 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva03g01080 896 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 404 508 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva03g01080 896 MobiDBLite consensus disorder prediction 834 848 - -
Bva03g01080 896 SFLD Haloacid Dehalogenase 470 844 - -
Bva03g01080 896 Gene3D - 670 846 IPR023214 -
Bva03g01080 896 Pfam E1-E2 ATPase 258 469 - -
Bva03g01080 896 SUPERFAMILY HAD-like 484 839 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01080 Bva-Chr3 9876368 9891849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01080 1 881 Primary Pumps ATPases AT5G23630 77.412 0.0 1415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01080 K14950 - gmx:100789385 1558.5