Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01043 ATGTTTCAGGAACCCAACACCCGGTGGCCGAGTCATACCCAGTCGACTCAGTGGACTCGATACCACGATAAGCTCTTTGAGCAAGCTCTCCTTGTTGTCCCCGAGAACTCGCCGGACCGGTGGGAGAAAATTGCCGAGCAAGTGCCCGGGAAGTCACCGATGGAGATAAGAGACCACTACGAGGCTTTGGTCCATGACGTGTCCGAGATTGATTCGGGTAGGATCGAGGTACCCAGTTACGCTGATGATATGGCGGCGCCGGCGGAGGGGAGTTTGTCGGTGTGGGATTCTTCGAATCAGATCTCCTTTGGGTCTAGACCGAGGCAATCTGAGACTGAGAGGAAGAAAGGGACTCCATGGACCGAAGAAGAACACCGGCTATTTCTCATTGGACTGCAGAAATTTGGCAAGGGGGATTGGAGAAGCATTTCTAGGAATGTTGTTGTGACAAGAACACCAACTCAAGTAGCTAGCCACGCGCAGAAATACTTCCTTCGCCAGAATTCGgtgaagaaagagaggaaacGATCAAGCATCCATGACATAACCACCGTGGACAGCAACTCGGCGCCGCCGGCCATTGATCAGAACTGGGTTCCTCCTCCGGGTGGTCCGGTGCAGCAGCCGCAGGAAATGCAGCTGCTGAATCCACCCCACCATTTTCCTGATCAGATGGGTGGATATGGGTATGCAAACTATGGTTTCCAAATGTA 713 0.5175 MFQEPNTRWPSHTQSTQWTRYHDKLFEQALLVVPENSPDRWEKIAEQVPGKSPMEIRDHYEALVHDVSEIDSGRIEVPSYADDMAAPAEGSLSVWDSSNQISFGSRPRQSETERKKGTPWTEEEHRLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDSNSAPPAIDQNWVPPPGGPVQQPQEMQLLNPPHHFPDQMGGYGYANYGFQM 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01043 237 SUPERFAMILY Homeodomain-like 12 64 IPR009057 -
Bva03g01043 237 SUPERFAMILY Homeodomain-like 113 169 IPR009057 -
Bva03g01043 237 Gene3D - 118 170 - -
Bva03g01043 237 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 12 237 - -
Bva03g01043 237 Gene3D - 10 77 - -
Bva03g01043 237 MobiDBLite consensus disorder prediction 97 119 - -
Bva03g01043 237 CDD SANT 119 164 IPR001005 -
Bva03g01043 237 ProSiteProfiles SANT domain profile. 115 168 IPR017884 -
Bva03g01043 237 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 115 167 IPR006447 GO:0003677
Bva03g01043 237 ProSiteProfiles Myb-like domain profile. 10 64 IPR001005 -
Bva03g01043 237 Pfam Myb-like DNA-binding domain 119 164 IPR001005 -
Bva03g01043 237 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 237 IPR043363 -
Bva03g01043 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 168 IPR017930 -
Bva03g01043 237 CDD SANT 18 64 IPR001005 -
Bva03g01043 237 ProSiteProfiles Myb-like domain profile. 112 164 IPR001005 -
Bva03g01043 237 SMART sant 116 166 IPR001005 -
Bva03g01043 237 SMART sant 14 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01043 Bva-Chr3 9072920 9075050 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva03g01043 Myb_DNA-binding 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01043 - - gmx:547481 358.221