Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01005 ATGGAAGttctaaaaattaaggatCAGAAGGTGCATAAGTTAGAGCACAAGATATTACATGGTTTATTAAATGAGGCACTTCCCATTGTTCTTGGACCACCACTGGCAGTGTCTAGTTTCAGAAGGAAACTATGCAGATCCTTCGTGCTGCAACCTGCAAGTGGAAAGGAACTGCTGAAGTTAGTATGGGACATTATCCTTGTTTCTTTGTATCCTCCATTTGACACATCTTCTAATTCTCTTGATAATTTGGTGGATGGAGATCTGGGATCCATCCCCTGGTCTGCATTGATAAGTGACGAGATTACTATATTGGAAAGACAGACAGAATGCCTAATTGCTGAAGATCTGGTTAAAGAACTCAGACAGGATATTTTGTGCAGCAAAGCTTATAAAGGTCATTTTGTGAAAGCAGAAAACCGATTGATTATACAGTA 437 0.3844 MEVLKIKDQKVHKLEHKILHGLLNEALPIVLGPPLAVSSFRRKLCRSFVLQPASGKELLKLVWDIILVSLYPPFDTSSNSLDNLVDGDLGSIPWSALISDEITILERQTECLIAEDLVKELRQDILCSKAYKGHFVKAENRLIIQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01005 145 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 6 125 - -
Bva03g01005 145 Pfam Domain of unknown function (DUF4378) 8 120 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01005 Bva-Chr3 7514068 7514505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g01005 16 125 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.964 3.02e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g01005 - - gmx:100789616 157.532