Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00971 ATGGACAATTTCGGCGTATTCGAATCTCCATATGTTAACACTATCTTCCCCGACATCTACCCCTGTTTAACAGATCAGTGGGGTGACTTGCCGTTTATTGTTAACGACTCCAAGGACGTGATCGTCTACGACTCACTTAACGACGCCGTTTCTTACGGTTGGTCGCTGTTAGATTATACGGCAATGGAACAGGCACCAAACGACGGTCTTGAGTTGAACCCAGCGGTGAAAACTCAAGAAGCTGCAGCTATATTTTTGAACGACAATACAGACAACATCGTTTTACATGACGGAGAGAAACTGAAGTCTCGTCGGACAAAGAGTACGGAGAGGCGCTATAGAGGAGTGAGGCAAAGACCATGGGGTAAGTTTGCAGCCGAAATTCGTGACCCGGCTAGGAACGGCGCGAGGACGTGGCTTGGCACTTACCAAACGGCTAAGGAAGCTGCTTTGGCTTACGATCGAGCTGCTTTCAAGTTACGTGGCGCTAAGGCTTTGTTGAATTTCCCTCATCTTATCGGTTCCGACGAGCCGCCACCAGTGAGAATTACGGGTAAACGGCGAGAGCAGCCGTGGGCTACAACACCAGAAAGTGTCTCCGGGAAGAAATGGAAAGGCTTGGCTCCAAGCGAAGCGGCGCCGGAGCAGAGGGAGACTGTGCCATA 665 0.5068 MDNFGVFESPYVNTIFPDIYPCLTDQWGDLPFIVNDSKDVIVYDSLNDAVSYGWSLLDYTAMEQAPNDGLELNPAVKTQEAAAIFLNDNTDNIVLHDGEKLKSRRTKSTERRYRGVRQRPWGKFAAEIRDPARNGARTWLGTYQTAKEAALAYDRAAFKLRGAKALLNFPHLIGSDEPPPVRITGKRREQPWATTPESVSGKKWKGLAPSEAAPEQRETVP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00971 221 Gene3D AP2/ERF domain 111 171 IPR036955 GO:0003700|GO:0006355
Bva03g00971 221 MobiDBLite consensus disorder prediction 175 221 - -
Bva03g00971 221 ProSiteProfiles AP2/ERF domain profile. 112 170 IPR001471 GO:0003700|GO:0006355
Bva03g00971 221 PANTHER DNA-BINDING DOMAIN 13 201 IPR044808 GO:0003700|GO:0009873
Bva03g00971 221 SUPERFAMILY DNA-binding domain 112 171 IPR016177 GO:0003677
Bva03g00971 221 Pfam AP2 domain 112 162 IPR001471 GO:0003700|GO:0006355
Bva03g00971 221 PRINTS Ethylene responsive element binding protein signature 152 172 IPR001471 GO:0003700|GO:0006355
Bva03g00971 221 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Bva03g00971 221 SMART rav1_2 112 176 IPR001471 GO:0003700|GO:0006355
Bva03g00971 221 CDD AP2 112 172 IPR001471 GO:0003700|GO:0006355
Bva03g00971 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 13 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00971 Bva-Chr3 6900063 6900728 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00971 13 183 AP2-EREBP Transcription Factor Family AT4G17500 49.123 3.73e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva03g00971 AP2 4.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00971 K09286 - jre:118349244 209.149