Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00963 ATGGAAACCTATGGATCCAGCTTCAGTTTCTCtacctctaatatcaatgattACTCGCTACACCAAGAAGAGCATCATGTAAGTACCTCTAATATCGATGCTTCTTGTCAAACCAGTTTCTCTAATTCACCAAGATCATCAAATTTAAGCAAACGCCGGCCGCCCTTAGAAAACATCAGAATCCCGCCCACCGCCGCCTTAACTCTTAGCTCCCAAAATCCGGTGGTAACAACCAGTTACAACGAGAGTTCTTTGGAGAATAAAGATGACAAACACTACAGAGGGGTCAGAAGACGGCCGTGGGGGAAGTACGCAGCCGAGATTCGTGATCCGAATCGAAAAGGCTCTAGGGTTTGGCTGGGAACCTTTGAAACCGCCATTGAAGCTGCTAAAGCTTATGATAGAGCCGCTTTCAAGATGAGAGGAAGCAAAGCTATACTGAATTTCCCTCTTGAAATCTGCAATTCTCCGGAATCGAATTCAACGGCCAGGATTggagagaaaaggagaagggaAGATGACAGTGagagtgaagaaaaagaattaggGTTTGCAGAGAACAGTAAGgtattgaagaagaagaaggaagactGTTCACCCAAAGGAGTTTCTCCAATGATTGGTCCGTTAACGCCGTCATGTTGGAAGGGGTTTTGGGACCCAGACGTAAAGGGGACTATCTTTAGTATACCTCCGTTATCGCCGTTATCTCCTCATCGTTCCTTTGGATGCTCACAGCTGATGGTTAGTTG 752 0.4122 METYGSSFSFSTSNINDYSLHQEEHHVSTSNIDASCQTSFSNSPRSSNLSKRRPPLENIRIPPTAALTLSSQNPVVTTSYNESSLENKDDKHYRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFETAIEAAKAYDRAAFKMRGSKAILNFPLEICNSPESNSTARIGEKRRREDDSESEEKELGFAENSKVLKKKKEDCSPKGVSPMIGPLTPSCWKGFWDPDVKGTIFSIPPLSPLSPHRSFGCSQLMVS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00963 250 MobiDBLite consensus disorder prediction 163 183 - -
Bva03g00963 250 MobiDBLite consensus disorder prediction 29 53 - -
Bva03g00963 250 MobiDBLite consensus disorder prediction 29 58 - -
Bva03g00963 250 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 233 - -
Bva03g00963 250 SUPERFAMILY DNA-binding domain 92 152 IPR016177 GO:0003677
Bva03g00963 250 PANTHER ERF FAMILY PROTEIN 19 233 - -
Bva03g00963 250 PRINTS Ethylene responsive element binding protein signature 132 152 IPR001471 GO:0003700|GO:0006355
Bva03g00963 250 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Bva03g00963 250 MobiDBLite consensus disorder prediction 158 183 - -
Bva03g00963 250 CDD AP2 91 150 IPR001471 GO:0003700|GO:0006355
Bva03g00963 250 SMART rav1_2 92 156 IPR001471 GO:0003700|GO:0006355
Bva03g00963 250 Gene3D AP2/ERF domain 91 152 IPR036955 GO:0003700|GO:0006355
Bva03g00963 250 Pfam AP2 domain 92 142 IPR001471 GO:0003700|GO:0006355
Bva03g00963 250 ProSiteProfiles AP2/ERF domain profile. 92 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00963 Bva-Chr3 6773027 6774067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00963 46 250 AP2-EREBP Transcription Factor Family AT5G51190 48.826 1.72e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva03g00963 AP2 1.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00963 K09286 - gmx:100795866 229.95