Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00959 ATGAAGATCTTTTTCTCTGGGCAGCTTTTCAATCCATTAACATTGCTACTCTTCCTTGTTTATCCTTCTTGCAACTCTCTAAATACCATAACTCCCAACCATCCTATCAAAGATGGTGATGTTTTGGTCTCCAACAAAGCCACCTTTGCCCTCGGATTCTTCAGTCCTGGCAATTCTAGAAACCGATATGTTGGAATTTGGTATAACAACGATTCAAAACAAACCGTTGTCTGGGTTGCTAATAGAGATACTCCTCTCACTAACACCTACGGTATCCTCTCCATCAACGGCCATGGAAACCTCGTCATCCTTGACTCTCAAACCCAAAATCCTAAACTCATTTGGTCGGTTAATGTTTTGGTTCCAGTCTTCTCTCCAATTACCTCAGCCAGGCTTCTAGATAATGGGAACTTCATCTTGGTTCACAATGAAAGCCAAAAGGTTCTATGGCAGAGTTTTGATTACCCTAGTAATACCATGCTTCCATATATGAAACTCGGTTTGGACCGGAAAACAGGGTTGAACCGGTTTCTGACATCATGGAAATCTCCGAACGACCCAGGAACTGGGAATTTCACTTGTGGGATTGATCCCTCTGGCTTTcctcaatttttcttgtacAAGAATGGGGCTCCACTATGGAGGCATGGATCTTGGACGGGTAAAAGATGGAGCGGTGTGCCCGAGATGACTACCAACTTCATATTGAATGCTAGTTTTGTGAACAATGCAAATGAGGTTTCTATCATGTATGGAGTCAAAGACCCTACAATTTTGTCAAGATTCGTTGTGATCGACGATATCGGATATGCTAGATCATTCATGTGGGATGCTCGAGAACATAGATGGTTCCAATTTTGGTATGACCCGGGAGAGGATTGTGACAACTTCAATCGGTGCGGGCCAAATGGAATTTGTGACCCGTataatgtggataagtttgagtgCAAGTGCTTGCCCGGGTTTGAACCCAAGTACCCACAAGAATGGTATCTTGGAGACGGGTCGGGTGGGTGTGTGAGAAATCCTAATGTGTCCACGTGTCAAAGCGGGGAGGGGTTTGTTCTGGTGGTACCAGTGAAGACGCCAGATACCTCAAAGGCACGTGTGGATGCTagtttgaatttgaaggaGCGTGAAGAGAAGTGCTTGAAGGATTGTTCTTGTGTAGCTTATACCACTGCAAATGAGAGCATAGGGAGTGGGTGTTTGTCGTGGCACGGAGATATGTTAGATATAAGAACATACACACATGTGGGACAAGATTTATTCGTACGTGTGGATGCACGTCTATTAgCTAAATATGCAAAGAAATCACAAGGTTCTCTCGGCAAGAAGAGGATGATAGCAATTATAGTGTTGTCGGCTTTTCTGGTCCTGCTTTTcatggtttatattttatattgttggtTCGTAAAGAAACAGAAACGAGCAAGGAGAAAGCATAGCAAATATCAATCAACCATTGATCTTCAAGATTCTCCAAGCATAAGAGACCTTGAAAGCAGACAAGATTTAGATTTACCATTCTTTGATCTAAGCGACATTGCTGAAGcaacaaataatttctctCCGGATAACATGCTTGGACAAGGTGGTTTTGGTTCTGTTTATAAGGGTCTATTCAGTAATGGAATGGCAATAGCAGTGAAGAGACTGTCAATTTTTTCTGGCCAGGGAATCAAAGAGTTTAAAAGTGAGGTTGCCTTGATTGCAAAACTCCAACACAGGAACTTGGTTAGGATCTTAGGTTACTGCATTGAAGGAGAGGAAAAGATGTTGATATATGAGTATTTGCCCAACAAAAGCTTGGACTATTACATTTTTGATGAATCTAAAAGTTCACAGCTAGATTGGAAGAAACGGTTGGATATTATATCCGGGATTGCTAGAGGGATCTTGTACCTTCATCAAGATTCAATACTAAGAGTCATTCATAGAGACTTAAAAGCCAGTAATATCTTGTTGGATTCTTCATTCAACCCAAAAATTGCAGACTTTGGTATGGCAAGAATATTTGGTAGGAATCAAATTGAAGCAAACACAAATTGTGTTGTTGGAACCTATGGTTACATGTCACCAGAATATGCAATGGAaggaatattttcaataaaatctgATGTATATAGCTTCGGAGTTTTGATTATGGAGATCATTACTGGAAGAAAGAATAGTGGTCATTACAATGACATTACCTCCTCCACTTTGGTTGGACATaTATGGGATCTATGGAGAGAAGGCAGAGCCATGGAGATTATTGATTCAACATTAGCTGACACGTACCTTGATCATGAAGTCCTAAGATGCATCCAAATTGGGCTTCTATGTGTTCAAGATTATCCAAAAGAGAGGCCAACTATGTCAGTAGTAATTTCTATGTTGGACAATGACACAATGCTTCCAACTCCCAAACAACCAGTATTCATTTTCAAGAGACTTATTCACTATAATGGAATTAATTCAGTAAATGGGTTGAGTATTACTAGGATGGAAGGCCGCTG 2501 0.3934 MKIFFSGQLFNPLTLLLFLVYPSCNSLNTITPNHPIKDGDVLVSNKATFALGFFSPGNSRNRYVGIWYNNDSKQTVVWVANRDTPLTNTYGILSINGHGNLVILDSQTQNPKLIWSVNVLVPVFSPITSARLLDNGNFILVHNESQKVLWQSFDYPSNTMLPYMKLGLDRKTGLNRFLTSWKSPNDPGTGNFTCGIDPSGFPQFFLYKNGAPLWRHGSWTGKRWSGVPEMTTNFILNASFVNNANEVSIMYGVKDPTILSRFVVIDDIGYARSFMWDAREHRWFQFWYDPGEDCDNFNRCGPNGICDPYNVDKFECKCLPGFEPKYPQEWYLGDGSGGCVRNPNVSTCQSGEGFVLVVPVKTPDTSKARVDASLNLKEREEKCLKDCSCVAYTTANESIGSGCLSWHGDMLDIRTYTHVGQDLFVRVDARLLAKYAKKSQGSLGKKRMIAIIVLSAFLVLLFMVYILYCWFVKKQKRARRKHSKYQSTIDLQDSPSIRDLESRQDLDLPFFDLSDIAEATNNFSPDNMLGQGGFGSVYKGLFSNGMAIAVKRLSIFSGQGIKEFKSEVALIAKLQHRNLVRILGYCIEGEEKMLIYEYLPNKSLDYYIFDESKSSQLDWKKRLDIISGIARGILYLHQDSILRVIHRDLKASNILLDSSFNPKIADFGMARIFGRNQIEANTNCVVGTYGYMSPEYAMEGIFSIKSDVYSFGVLIMEIITGRKNSGHYNDITSSTLVGHIWDLWREGRAMEIIDSTLADTYLDHEVLRCIQIGLLCVQDYPKERPTMSVVISMLDNDTMLPTPKQPVFIFKRLIHYNGINSVNGLSITRMEGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00959 833 SMART blect_4 33 156 IPR001480 -
Bva03g00959 833 CDD EGF 293 323 - -
Bva03g00959 833 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Bva03g00959 833 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 828 - -
Bva03g00959 833 Pfam S-locus glycoprotein domain 214 325 IPR000858 GO:0048544
Bva03g00959 833 ProSiteProfiles Bulb-type lectin domain profile. 27 153 IPR001480 -
Bva03g00959 833 CDD PAN_AP_plant 346 427 - -
Bva03g00959 833 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
Bva03g00959 833 ProSiteProfiles Protein kinase domain profile. 523 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00959 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Bva03g00959 833 PIRSF SRK 2 831 IPR024171 GO:0004674
Bva03g00959 833 CDD B_lectin 33 156 IPR001480 -
Bva03g00959 833 Pfam D-mannose binding lectin 75 182 IPR001480 -
Bva03g00959 833 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672|GO:0006468
Bva03g00959 833 Gene3D Phosphorylase Kinase; domain 1 483 598 - -
Bva03g00959 833 Gene3D - 24 153 IPR036426 -
Bva03g00959 833 ProSiteProfiles EGF-like domain profile. 290 328 IPR000742 -
Bva03g00959 833 CDD STKc_IRAK 529 796 - -
Bva03g00959 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Bva03g00959 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 40 828 - -
Bva03g00959 833 SUPERFAMILY Protein kinase-like (PK-like) 507 812 IPR011009 -
Bva03g00959 833 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Bva03g00959 833 SMART serkin_6 523 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00959 833 Pfam PAN-like domain 348 413 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00959 Bva-Chr3 6701513 6705958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00959 479 833 Receptor kinase-like Gene Family AT4G11530 53.930 2.47e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva03g00959 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00959 - - gmx:100812814 1135.94