Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00931 ATGAACAACGGCACTATCAATTCCACCTATCACAACAATGATTCATTGGATGGTGGATTCTCAGATGCCATCATATTCACACTTGGTACGTTCTTCTTATTCTTAACTTGTCTCTGGGCCAGTTGCCGTCTTAACCTACATTTGATCGTGTTCCACGTTTTGAGTGGACAAGAACAACAAACAGGAGCAGCAGCAGACCACTCTGCAGAGGTTAACAACAGAGTAAAAGGTCTTGATGAAGCCATTATTCATGGCTATCCGAAGATCCTCTATTCTCAAGTGCAGAATGGCGATTCGGTTTCATCTTGCTGCTCCATTTGCTTGGTGGATTTTAAGGAAGATGATGAACTTCGTATGTTACCAGATTGTGGCCATTTTTACCATGTTAATTGTATTGATTCCTGGCTTAAGCTGCATCCCACTTGTCCAATATGTAGAAATTTACCGGTTAGAGCTTCAGAATCTAGTATGCCCGCAGAAGAGGTAAGTCTCCGGGTTGAATA 503 0.4215 MNNGTINSTYHNNDSLDGGFSDAIIFTLGTFFLFLTCLWASCRLNLHLIVFHVLSGQEQQTGAAADHSAEVNNRVKGLDEAIIHGYPKILYSQVQNGDSVSSCCSICLVDFKEDDELRMLPDCGHFYHVNCIDSWLKLHPTCPICRNLPVRASESSMPAEEVSLRVE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00931 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 164 IPR045899 -
Bva03g00931 167 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bva03g00931 167 SUPERFAMILY RING/U-box 82 148 - -
Bva03g00931 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 150 IPR013083 -
Bva03g00931 167 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 4 164 - -
Bva03g00931 167 SMART ring_2 104 145 IPR001841 -
Bva03g00931 167 Pfam Ring finger domain 104 146 IPR001841 -
Bva03g00931 167 CDD RING-H2_PA-TM-RING 103 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00931 Bva-Chr3 6320871 6321374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00931 77 164 C3H Transcription Factor Family AT2G35910 53.409 5.00e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00931 - - csv:101218618 125.176