Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00930 ATGAACGTCAATACCTCCTACAACAGCAGCACAGTCGAAGATCATGACAGCACAAATGAGCTTACATATGGAATTGTTTCCATGATTGGCATGTTCTTCTTAGTCACAATCATTTGTTGTGCTTGCATTCGACTTCGAAACTCTTCAGCCAACCCAAatatgttcaattttttatctgGAATTTATTCATCTGGTGTAGCTCAAGGCGCGGCTGCTCATACAGAACGTGGCCTCGATGACAACACTCTTGATAGTTATCCAAAGCTTTTGTATTCTGAAGTCCAAAAGGGGAATTTAGTCTCTTTATGCTGCTCTATTTGCTTAGGAGATTATAAAGATACTGAGACCCTAAGATTACTTCCAGATTGTGGCCATGTCTTCCATCTTAGTTGTGTTGATCCGTGGTTAAAGTTGCACCCGACCTGCCCAATATGCAGAAGTTCATCAGTTCAAACTCTGCAATCAAGCACTTCTGCGCAGGAGACACTCGGCCATGTTGTGTA 503 0.4115 MNVNTSYNSSTVEDHDSTNELTYGIVSMIGMFFLVTIICCACIRLRNSSANPNMFNFLSGIYSSGVAQGAAAHTERGLDDNTLDSYPKLLYSEVQKGNLVSLCCSICLGDYKDTETLRLLPDCGHVFHLSCVDPWLKLHPTCPICRSSSVQTLQSSTSAQETLGHVV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00930 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 160 IPR045899 -
Bva03g00930 167 Pfam Ring finger domain 104 146 IPR001841 -
Bva03g00930 167 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 1 160 - -
Bva03g00930 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 151 IPR013083 -
Bva03g00930 167 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bva03g00930 167 SMART ring_2 104 145 IPR001841 -
Bva03g00930 167 SUPERFAMILY RING/U-box 84 151 - -
Bva03g00930 167 CDD RING-H2_PA-TM-RING 103 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00930 Bva-Chr3 6302188 6302691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00930 77 160 C3H Transcription Factor Family AT2G35910 57.143 9.99e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00930 - - gmx:102663718 147.517