Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00927 ATGGCAAGTATTATAGACTTCACCACAGCTGTatcttgcttcttcttcttcttcttcgtcttTATTTTAGCAATTGTGATTACAATTGCCGGATATTGCACCCGTCAGCCACCTCCGGCCAATGACACCGGTGGTGCCGCCACAGACTCCGACCACTCCACGATCACGGTGGAACCGTCCACGGATGAAAAGGATTTGTGTAGCAATCCAAAAATCCTATACTCCAAAGCCAAATTCTATGATAGCAGTTCAAGTAATTCATGTTGCTCTATATGCTTGATAGATTATCAAGAATCTGATTCATTACGAGTTCTTCCAGATTGTGGTCATTTCTTCCATGTCAATGGTGGAATCCTTGAAGAGTACTCTGAAGATGTATTGTGTATCGTGGAACATTCTGTGCAAAGTAAAGGGGAAAAAAGATTGGAGATAGTACTGAGTGAAGCGGTTCGCAGCAATTGTTACACAGGCACCCCATTGGTGAAATATGGTATTGAGAGGAGCTTCAGCTCTGATCTCTTGCCATTATACCGTGGTACTGTGCCTATCCAAAGAGCTTTACAgGATGGTAACAAGGAAACTGGAGTATCATTAGGCATCACTGTTCATGAACTGGATGCTGGACCAATCATTGCTAGTGAAGTATTTCAACTtgatgatcaaattaatatgcTTGTCTTTTTGTGCCACAAAGAATCTGATTTTCTGAACTTCTTTGCAATGATTCTTTA 731 0.3899 MASIIDFTTAVSCFFFFFFVFILAIVITIAGYCTRQPPPANDTGGAATDSDHSTITVEPSTDEKDLCSNPKILYSKAKFYDSSSSNSCCSICLIDYQESDSLRVLPDCGHFFHVNGGILEEYSEDVLCIVEHSVQSKGEKRLEIVLSEAVRSNCYTGTPLVKYGIERSFSSDLLPLYRGTVPIQRALQDGNKETGVSLGITVHELDAGPIIASEVFQLDDQINMLVFLCHKESDFLNFFAMIL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00927 243 Pfam RING-like zinc finger 89 114 IPR001841 -
Bva03g00927 243 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 115 IPR045899 -
Bva03g00927 243 Gene3D - 169 230 - -
Bva03g00927 243 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 115 - -
Bva03g00927 243 SUPERFAMILY Formyltransferase 173 223 IPR036477 GO:0009058
Bva03g00927 243 Pfam Formyl transferase 173 216 IPR002376 GO:0009058
Bva03g00927 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 137 IPR013083 -
Bva03g00927 243 SUPERFAMILY RING/U-box 88 114 - -
Bva03g00927 243 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00927 Bva-Chr3 6270731 6275866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00927 70 115 C3H Transcription Factor Family AT5G06490 52.000 4.47e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00927 - K00604 tcc:18598436 89.7373