Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00920 ATGGGTTTAATTCAGAATCAGATGAATGGTGACGGTCCAGTACCTAAAGGACCGGCCGAACTGAACCGAATTCAACATATGCAAGATGAGGATGGGCAGAAGGCCAGGGGTGGGGTAACGGGAGAAGGGCAGGAACTTTCCGTGGAAGACGAGTCGCGGATAAATGATGGCACAGAGGGAGAGATGTACGGTCACCACGTAAATGGAAGAGCACAGGTTCTGAATCTGACGGTTGAGGACCAGATACAGGTTGTGGAATTGGACCGGACAAATACGACCGGTTCGCATGAGAAAACCCAGGCACCTCTGGTTCGCTGGGAGAGGTTCTTGCCGGTTCGATCTTTGAAGGTTTTGCTGGTTGAGAATGATGATTCGACTCGCCATGTGGTCAGTGCTTTGCTCAGAAACTGTGGTTATGAAGTTGTAGCTGTCGCCAATGGTCTGCAAGCATGGAAAGTTTTAGAAGATTTAACAGCTAATATTGATCTGGTTTTGACTGAGGTGAACCTTCCATGTGAAACCGGCATCGGTCTTCTATCCAAGATAATGAACCACAAGTCTCACAAAAATATTCCTGTGATTATGATGTCGTCTCATGATTCTATGAGTATAGTATTTAAGTGTTTGTCAAAGGGTGCAGTTGACTTTTTGGTTAAGCCAATACGAAAGAATGAGCTTAGAAACCTTTGGCAGCATGTTTGGAGGAAATGCCAGAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTACGAACTCAAAAGTCTACGAAGTCTGGAAGAGAGGAGCATTCAGACAAGAAGCATGACAACAACTATGATGAGGATGATATTGGAAGCACTGGCTTGAATGCTAGAGATAGAAGTGACAATGGAAGCGGCACCCAGAGTCCTTGGACAAAGATTGTAGTGGAAGTTGATAGCCCTCGACGGATGTCCCCTTGGGACCATCTGACTGATCAACCTGGAGGTACATGTGCCCAAGTTACTCCTTCAACACCCGAAGAAAACGACAACAATAGGGTGCGTCTAACAAAGGGTGGGGAGACACAAGTTGATGAACTTGTTCTGAACATGGTCACTGACAAAGAATTGGAAACTGGAGTGCCAAGAACATTAACTTTGCAACCTCAGAACCAGCGGAAAGAAGTGCCCTCCAATCTATCAAGCTCCAATCagcctaaaattaattcagagaaagaaaaggttgatgaagagaaagagaagggaCAATTAATAGAGCCAAATAGTGAGAAACAAAATGGAGAATGCAAAAGTCAAATTGCTGATCCAAAAGATGCTATTACCAGTAATGCTACTAATCCTATGCTAGAAGTCCAAGTTGCAGACAATCCCAATGGCAAAGCTCGTTGTATGAATGACAAAAATGGCCATGGCTACAATGAAGTGGCTTCACTTGACTTGAGAATGAAGCCTGTGAAAGACAAAAATCCCTATGGCTACAATGAAGCATCTTCATTTGACTTCAGTGCAAAGACTTCGAACACTGTAACTTTCCATGGCAGCAGTGCATTAGACCAAAACATTTTAAGACACTCGGATAATTCTGCCTTCTCCAGGTACAACTTGGCATCTCATCAGGCTCCAACTGGAAATGTGGGAAGTTGTTCTCCAATTGATAATAGCTCTGAGGCTGCAAAGACTGAATCAATGCAAGGCATGCAATATTTCAATAAGATGCCTCCAAATCAAAATTCTAATGGAAGCAATAACATCAATGATATGGGCTCCAGCACTATTGACAAGCCAACACAAATACCCACAGTCAAACATCTCAATCCCTCTTCAGCATTCCAGGTTGCGCAAAATGCATCTCCTCAAAACGTACCTCAAGAAAATCGAGAGAGACAGCATATACAAGTGcaacaccaccaccaccaccaccaccatcacCACCACCACATGCACAATATGGTCGCACACCAAAAAGTCAACTATAATGGCCAATCTGTCCAAAACAAGACAGCTCCATCTCCCCATGATGGTTCATCTAATGTCTTGAGTGCAGCAATAAATAGTGATGCTGGAAATCAGAGTCTAAATGGGAGTGCCTCAGGAAGCAACCATGGAAGCAATTTACATATTGGCTGCAATGCTACTTTAATTGCTGAAGGATGCAACATGGAAAATGATTTTAGAATAGCTgagaaagagggaaaaattattaatggaAGAAATTTTGAGACTACAAATGCTACCATCCAGGCTCGATTCCCTCAAAGAGAGGCTGCTTTACAAAAATTtcgccaaaaaagaaaagagagatgcTTTGAGAAGAAGGTTCGCTACCAAAGCAGGAAGAAACTAGCAGAACAAAGGCCACGGGTTCGAGGACAATTCGTGCGACAGGCAAAGGAAgagaacaaagagaaagatgcCCGTCCATA 2402 0.4101 MGLIQNQMNGDGPVPKGPAELNRIQHMQDEDGQKARGGVTGEGQELSVEDESRINDGTEGEMYGHHVNGRAQVLNLTVEDQIQVVELDRTNTTGSHEKTQAPLVRWERFLPVRSLKVLLVENDDSTRHVVSALLRNCGYEVVAVANGLQAWKVLEDLTANIDLVLTEVNLPCETGIGLLSKIMNHKSHKNIPVIMMSSHDSMSIVFKCLSKGAVDFLVKPIRKNELRNLWQHVWRKCQSSSGSGSESGVRTQKSTKSGREEHSDKKHDNNYDEDDIGSTGLNARDRSDNGSGTQSPWTKIVVEVDSPRRMSPWDHLTDQPGGTCAQVTPSTPEENDNNRVRLTKGGETQVDELVLNMVTDKELETGVPRTLTLQPQNQRKEVPSNLSSSNQPKINSEKEKVDEEKEKGQLIEPNSEKQNGECKSQIADPKDAITSNATNPMLEVQVADNPNGKARCMNDKNGHGYNEVASLDLRMKPVKDKNPYGYNEASSFDFSAKTSNTVTFHGSSALDQNILRHSDNSAFSRYNLASHQAPTGNVGSCSPIDNSSEAAKTESMQGMQYFNKMPPNQNSNGSNNINDMGSSTIDKPTQIPTVKHLNPSSAFQVAQNASPQNVPQENRERQHIQVQHHHHHHHHHHHHMHNMVAHQKVNYNGQSVQNKTAPSPHDGSSNVLSAAINSDAGNQSLNGSASGSNHGSNLHIGCNATLIAEGCNMENDFRIAEKEGKIINGRNFETTNATIQARFPQREAALQKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQAKEENKEKDARP 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00920 800 Pfam CCT motif 746 788 IPR010402 GO:0005515
Bva03g00920 800 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 56 777 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 253 281 - -
Bva03g00920 800 PANTHER TWO-COMPONENT RESPONSE REGULATOR 56 777 IPR045279 GO:0009736
Bva03g00920 800 MobiDBLite consensus disorder prediction 29 48 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 625 642 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 772 800 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 369 394 - -
Bva03g00920 800 SUPERFAMILY CheY-like 113 238 IPR011006 -
Bva03g00920 800 MobiDBLite consensus disorder prediction 238 252 - -
Bva03g00920 800 ProSiteProfiles CCT domain profile. 746 788 IPR010402 GO:0005515
Bva03g00920 800 MobiDBLite consensus disorder prediction 566 620 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 395 412 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 566 642 - -
Bva03g00920 800 CDD psREC_PRR 117 220 - -
Bva03g00920 800 Gene3D - 114 275 - -
Bva03g00920 800 ProSiteProfiles Response regulatory domain profile. 116 234 IPR001789 GO:0000160
Bva03g00920 800 MobiDBLite consensus disorder prediction 366 425 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 282 300 - -
Bva03g00920 800 MobiDBLite consensus disorder prediction 321 336 - -
Bva03g00920 800 Pfam Response regulator receiver domain 117 228 IPR001789 GO:0000160
Bva03g00920 800 MobiDBLite consensus disorder prediction 238 344 - -
Bva03g00920 800 SMART REC_2 115 230 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00920 Bva-Chr3 6153362 6170608 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00920 64 327 Response Regulator Gene Family AT5G60100 56.679 6.01e-81 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bva03g00920 Response_reg 3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00920 K12129 - zju:107413622 708.368