Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00914 aTGGATATGTTCGATCTCAATGTCGATTTTGTGAATGGTGAGCCAACTTTtgaaatggaaatggaaaagcACCCTGAAAGTTCTCTGATCAAAATGGAGCATTCCGGGAGCTCCAAATCCTCTGTGGTGAACTCTGAAGAAGCCGAAGATTTATCGAACAATTCTTCGGCCTTTGCTTTTGATATactgaagaaagaaacaaatggGTTGGGGGTAAAGGAAGAAAGCTCAACCCCTGAGATAGTCACCAGAATGCTTTTTCCGGTGACCGGAGATGGAGGAGGCCGAGATTCTGATCCCGGGTTGGGATTGTCGGCGAGGAGTCAATGGCtgaatttgtcattttctgaGCATGGTGAGCAAGCTGAGATGAGAATCTTGCAGCAGAAGCAACCACAAGTACGGAAAAGTCGCCGGGGACCAAGGTCCCGGAGCTCGCAGTACCGGGGCGTCACCTTTTATCGCCGGACCGGTCGCTGGGAATCTCATATATGGGATTGTGGGAAGCAGGTGTATTTAGGTGGATTTGACACTGCTCATGCTGCAGCAAGAGCATACGATCGGGCTGCGATTAAGTTCCGGGGAGTTGATGCTGatattaactttaatttgaGTGACTATGATGAAGATATGAAGCAGATGACGAGTTTGAGTAAAGAAGACTTTGTCCATGCACTTCGTCGCCAAAGCAGTGGAGTCTCAAGGGGGAATTCAAGATGCAGAAGTGCAGCACTGCAAAAATGTAGTCAATGGGAAGCACGAACGAGGCAGTTCCTTGGCATGAAAGTTTATGAGAACTTGCCCACCAATGGAAGAGAAGGGTTAACGAGCTGTGATCCCATTACACAAGGAGGAGAGACAATTGTAGAATCCAGTAAAGGAGGTAGTTGCCACAATCTTGATTTGAGCCTTGGGATTTCACCAACTTCTAAAATATCAGCCAAAGGGGGACCAATGGCTGATAACTCTGGTCCTGCATTGAACATCAACAGGGGACAAGCCATTTATGGCCTACCTATGGCACCTAAATTGGATAGAATCTTCACTGGCTTGTATTCCTGTTATGTGAAAAACTACGAGGGGAAAGAACCAGAGAAGAGAATGGAAGCTGTTCCCCTACAAAGATTCTCAAACTTGGCTTGGCAAGTTCAGAGCAACGGCAGCATTGTCCCGGTGCCGGTGCCGGTGCCATCCAATGCAGCATCATCAGGATTCGCTTCTTCTAATAACCTTTCGTCGTTAACACCACTTTCAATCAATCCCCAATA 1268 0.4495 MDMFDLNVDFVNGEPTFEMEMEKHPESSLIKMEHSGSSKSSVVNSEEAEDLSNNSSAFAFDILKKETNGLGVKEESSTPEIVTRMLFPVTGDGGGRDSDPGLGLSARSQWLNLSFSEHGEQAEMRILQQKQPQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYDEDMKQMTSLSKEDFVHALRRQSSGVSRGNSRCRSAALQKCSQWEARTRQFLGMKVYENLPTNGREGLTSCDPITQGGETIVESSKGGSCHNLDLSLGISPTSKISAKGGPMADNSGPALNINRGQAIYGLPMAPKLDRIFTGLYSCYVKNYEGKEPEKRMEAVPLQRFSNLAWQVQSNGSIVPVPVPVPSNAASSGFASSNNLSSLTPLSINPQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00914 422 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 415 - -
Bva03g00914 422 MobiDBLite consensus disorder prediction 129 148 - -
Bva03g00914 422 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7-LIKE 3 415 - -
Bva03g00914 422 MobiDBLite consensus disorder prediction 27 46 - -
Bva03g00914 422 Pfam AP2 domain 147 195 IPR001471 GO:0003700|GO:0006355
Bva03g00914 422 SMART rav1_2 147 209 IPR001471 GO:0003700|GO:0006355
Bva03g00914 422 MobiDBLite consensus disorder prediction 31 46 - -
Bva03g00914 422 CDD AP2 147 205 IPR001471 GO:0003700|GO:0006355
Bva03g00914 422 ProSiteProfiles AP2/ERF domain profile. 147 203 IPR001471 GO:0003700|GO:0006355
Bva03g00914 422 Gene3D AP2/ERF domain 146 205 IPR036955 GO:0003700|GO:0006355
Bva03g00914 422 SUPERFAMILY DNA-binding domain 146 204 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00914 Bva-Chr3 6093029 6097817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00914 3 262 AP2-EREBP Transcription Factor Family AT2G28550 54.945 8.35e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva03g00914 AP2 5.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00914 K09284 - qsu:112017577 374.4