Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00898 ATGGCTACCGCGAGGACGGTGAAGGACGTTTCTCCTCACGAGTTCGTGAAGGCTTACTCCGCTCATCTCAAGCGCTCAGGCAAGATAGAGCTTCCCGAGTGGACGGATCTTGTAAAAACTGCAAGATTTAAAGAATTGGCTCCTTATGATCCTGACTGGTATTATGTGAGAGCTGCCTCCATGGCAAGAAAGATCTACTTGAGAGGTGGCCTTGGTGTTGGTGCCTTTCGGAGGATATATGGTGGAAGCAAGAGGAATGGAAGTCGTCCCCCACATTTCTGTAAGAGCAGCGGAGGAATTGCCCGTCACATTCTGCAACAATTGCAAATTATGAACATTATTGAGGTTGATCCCAAAGGCGGGAGGAGAATCACTTCTAATGGTCAAAGGGATCTTGACCAAGTTGCGGGTCGAATTGCGGTTACTTCTTG 431 0.4826 MATARTVKDVSPHEFVKAYSAHLKRSGKIELPEWTDLVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLQIMNIIEVDPKGGRRITSNGQRDLDQVAGRIAVTS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00898 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Bva03g00898 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 140 IPR036390 -
Bva03g00898 143 PANTHER 40S RIBOSOMAL PROTEIN S19 3 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Bva03g00898 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Bva03g00898 143 Gene3D - 1 142 IPR036388 -
Bva03g00898 143 PANTHER 40S RIBOSOMAL PROTEIN S19-1-RELATED 3 142 - -
Bva03g00898 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00898 Bva-Chr3 5930166 5932085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00898 1 141 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 87.234 2.80e-94 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00898 K02966 - twl:119997083 270.781