Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00896 ATGGTGGCCTTCATGGCGATGATTCTCCTTGCTGCCACCTCCGTATTCTCCGACGACATGATCCCAGTGCCCACCGACAAGGCCCAAGTGACCACATGGTTCAACGCAAACGTGAAGCCATTGGCAGAACGAAAAGAACTCGACCCTCCATTGGTGACTgcagagaaggagaagaaagttaTTAAGGTCATGAAAGATGGTAGTGGCGATTTTACTACCATAACGGATGTCATCAAAAGCCTCCCAGCAGGAAACACCAAGCGTGTGATTGTTCACATTGTAGGAGTCTACAACGAGAAGATCAAAATTGAAAGGAGCAAGCCGTTCAGTACACTTTATGGGTCGCCTAATAACATGCAAAACTTGACCTTTGATGGTACTGCATTTCATCATGGCACTGTTGATAGTGCTTCATTGATCGTTGAACCTGACTACTTCGTTGCTGCAAATATCATCATCTCGAATTCTGCACCGAGGCAAGATGGGAAGAGGCCCGGCGCACAAGCCTTGGCATTGAGGATTTCCGGAGACAAAGCAACATTCTATAATTGCAAACTATTCGGATTTCAGGATACACTGTGTGATGATAAGGGCAAGCATTTTTTGAAAGATTGCATGATTCAGGGCACTGTGGATTTCATCTTCGGAAGTGGAAAGTCTATATATCTGAACACTCAATTGAATGTGCTTGGGGATAGTGGGATGACAGTAATAGCAGCACAAGCAAGAGTAACCGATACAAATGACATAGGATACTCATTTGTGCATTGCGAGGTAACTGGGACTGGGACGGGCACGTACTTGGGCAGAGCATGGACCGCAATGCCTAGAGTGGTTTATGCTTACTCAACCATGTCCAGTTTAGTCAACCCCGCTGGCTGGATCGATAACATTAAGCCTGAAAATGCCAATACTGTGTATTTTGGAGAGTACAAGAATAGCGGGCCAGGTGCAGATCCAAGCAAGCGCGCCAAGTTCACAAAGCAACTAAGTGAAGCAGAAGCTAAACCTTACCTCACCCTTGGATATATTGAGGGCTCCAAATGGCTTCTTCCTGCTCCAACACTCTA 1070 0.4523 MVAFMAMILLAATSVFSDDMIPVPTDKAQVTTWFNANVKPLAERKELDPPLVTAEKEKKVIKVMKDGSGDFTTITDVIKSLPAGNTKRVIVHIVGVYNEKIKIERSKPFSTLYGSPNNMQNLTFDGTAFHHGTVDSASLIVEPDYFVAANIIISNSAPRQDGKRPGAQALALRISGDKATFYNCKLFGFQDTLCDDKGKHFLKDCMIQGTVDFIFGSGKSIYLNTQLNVLGDSGMTVIAAQARVTDTNDIGYSFVHCEVTGTGTGTYLGRAWTAMPRVVYAYSTMSSLVNPAGWIDNIKPENANTVYFGEYKNSGPGADPSKRAKFTKQLSEAEAKPYLTLGYIEGSKWLLPAPTL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00896 356 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 27 351 - -
Bva03g00896 356 SUPERFAMILY Pectin lyase-like 58 352 IPR011050 -
Bva03g00896 356 Pfam Pectinesterase 61 346 IPR000070 GO:0030599|GO:0042545
Bva03g00896 356 ProSitePatterns Pectinesterase signature 2. 207 216 IPR033131 -
Bva03g00896 356 PANTHER PECTINESTERASE 63-RELATED 27 351 - -
Bva03g00896 356 Gene3D - 54 353 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00896 Bva-Chr3 5921268 5922817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00896 7 356 Carbohydrate Esterase AT1G69940 58.405 6.43e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00896 K01051 - gmx:100813174 490.73