Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00895 ATGgcagaaaaaataagatgCTCAGCCATCATTTGGGCTTCCATGGTGGTGATTCTCTTTGCTCCCCCCTTCGTCGTCTCCGATGACAGAATCCCAGTGCCCCCCAACAAAGCCCAAGTGGCCTCATGGTTCAATGCAAACGTGAAGCCATTGGCACAGCGAAAAGACATTGACCCTCCGTTGGTGACTGCAGagaaatttaagaaagttATTAAGGTCATGAAAGATGGTAAAGGCCATTTTAAAACCATAACGGATGCCATCAAAAGCATCCCAGCAGGGAACACCAAGCGTGTGATTATTCACATTGGAGGAGGAGTCTACAACGAGAAGATCAAAATTGAAAGGACCAAGCCATTCATTACATTTTATGGGTCGCCTAATAACATGCCAAACTTGACCTTTGGTGGTACTGCATTTCATCATGGCACTGTTGATAGTGCTACATTGATTGTTGAACCTGACTACTTCGTGGCTGCAAATATCATATTCTCGGTTAGTATATCATCATG 512 0.4238 MAEKIRCSAIIWASMVVILFAPPFVVSDDRIPVPPNKAQVASWFNANVKPLAQRKDIDPPLVTAEKFKKVIKVMKDGKGHFKTITDAIKSIPAGNTKRVIIHIGGGVYNEKIKIERTKPFITFYGSPNNMPNLTFGGTAFHHGTVDSATLIVEPDYFVAANIIFSVSISS 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00895 170 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 166 - -
Bva03g00895 170 Pfam Pectinesterase 71 165 IPR000070 GO:0030599|GO:0042545
Bva03g00895 170 PANTHER PECTINESTERASE 63-RELATED 37 166 - -
Bva03g00895 170 SUPERFAMILY Pectin lyase-like 68 164 IPR011050 -
Bva03g00895 170 Gene3D - 29 170 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00895 Bva-Chr3 5915956 5916821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00895 16 163 Carbohydrate Esterase AT1G69940 58.108 5.45e-54 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00895 K01051 - gmx:100306177 214.542