Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00893 ATGGCGATGATTCTCCTTGCTGCCACCTCCGTATTCTCCGACGACACAATCCCGGTGCCCGCCGACAAGGCCCAAGTGACCACATGGTTCAACGCAAACGTGAAGCCATTGGCAGAACGAAAAGACCTTGACCCTCCATTGGTGACTgcagagaaggagaagaaagttaTTAAGGTCATGAAAGATGGTAGTGGCGATTTTACTACCATAACGGATGCCATCAAAAGCATCCCAGCAGGAAACACCAAGCGTGTGATTGTTCACATTGGAGGAGGAGTCTACAACGAGAAGATCAAAATTGAAAGGAGCAAGCCGTTCATTACACTTTATGGGTCGCCTAATAACATGCCAAACTTGACCTTTGGTGGTACTGCATTTCATCATGGCACTGTTGATAGTGCTTCATTGATCGTTGAATCTGACTACTTCGTTGCTGCAAATATCATCATCTCGAATTCTGCACCGAGGCCAGATGGGAAGAGGGCCGGAGCACAAGCCTTGGCATTGAGGATTTCCGGAGACAAAGCAACATTCTATAATTGCAAATTATTCGGATTTCAGGATACACTGTGTGATGATAAGGGCAAGCATTTTTTCAAAGATTGCATGATTCAGGGCACTGTTGATTTCATCTTCGGAAGTGGAAAGTCTATATATCTGAACACTCAATTGAATGTGCTTGGGGATAGTGGGATGACAGTAATAGCAGCACAAGCAAGAGTAACCGATACAAATGACATAGGATACTCATTTGTGCATTGCGAGGTAACCGGGACTGGGACTGGCACGTACTTGGGCAGAGCATGGACCTCAATGCCTAGAGTGATTTATGCTTACTCAACCATGTCCGGTATTGTCAACCCCGAAGGCTGGAGCGATAACATGAAACCTGAAAATGACAAGACTGTGTATTTTGGAGAATACAAGAACAGCGGGCCAGGTGCAGATCCTAGCAAGCGTGCAAAGTTCACCAAGCAGCTAAGTGAAGCAGAAGCTAAACCTTACCTCACCCTTGGATTTATTGAGGGCTCCAAATGGCTTCTTCCTGCTCCAACACTCTA 1061 0.4515 MAMILLAATSVFSDDTIPVPADKAQVTTWFNANVKPLAERKDLDPPLVTAEKEKKVIKVMKDGSGDFTTITDAIKSIPAGNTKRVIVHIGGGVYNEKIKIERSKPFITLYGSPNNMPNLTFGGTAFHHGTVDSASLIVESDYFVAANIIISNSAPRPDGKRAGAQALALRISGDKATFYNCKLFGFQDTLCDDKGKHFFKDCMIQGTVDFIFGSGKSIYLNTQLNVLGDSGMTVIAAQARVTDTNDIGYSFVHCEVTGTGTGTYLGRAWTSMPRVIYAYSTMSGIVNPEGWSDNMKPENDKTVYFGEYKNSGPGADPSKRAKFTKQLSEAEAKPYLTLGFIEGSKWLLPAPTL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00893 353 PANTHER PECTINESTERASE 63-RELATED 23 348 - -
Bva03g00893 353 Pfam Pectinesterase 57 343 IPR000070 GO:0030599|GO:0042545
Bva03g00893 353 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 348 - -
Bva03g00893 353 Gene3D - 50 350 IPR012334 -
Bva03g00893 353 SUPERFAMILY Pectin lyase-like 54 349 IPR011050 -
Bva03g00893 353 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00893 Bva-Chr3 5883745 5908418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00893 3 353 Carbohydrate Esterase AT1G69940 59.829 1.25e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00893 K01051 - gmx:100786427 525.013