Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00879 ATGGATTCAGACCACCTTTCAAAACCTTCAGACCCTCTCGTCTCGTTTCTCGAACGCGTTCAAGAAGCCGCATTTAACACTTTGGGGGCAAACAACTGCGACCCCAAAACCTACGTTGACTTGTCATTGAAGTTCGATTTGCCAGCCACCGAGGAGGCATTCGATAAGCTTCCCAGGTCTGCTAATGGCTCTGTTCTAGTCGCGGATTTCAATTGTTTCATAGAGAGGTATTTTGATGGTGCAGGAGATGATCTGGTGTTCTTCGAACCAGAGGATTACGTTCCCGAACCAGAGGGTTTCTTGCCCAAGGTGGAGAATCCGAAGGTGAGGGAGTGGGCATTGAAGGTCCATTCCctttggaaaagtttgagtgGGAAAGTATCCAGTGGGGTGAAAACACAGCCCCAACTGCAtacttttcttcctcttccatGTTCTTTTATAATTCCTGGTTCAAGGTTTCGTGAGGTCTATTATTGGGACTCCTACTGGGTAATTAGGGGCTTGCTAGTGAGTAAAATGTATAAGACTGCTACAGCAATTGTGACTAATCTCATTTATCTCATAGAAGAATATGGCTTTGTGCTTAATGGTGCTAGAGCCTACTACACTAACAGGAGCCAACCTCCCCTTTTAAGTGCTATGATTTATGAGGTATACAACAGCACTGGTGATTTAGAATTGGTCAAACGAGCTCTACCTGCATTACTGAAAGAGTACGAGTTTTGGAATTCAGATATACATAGGGTGACCATTCAGGATGCTCAAGGTTACACTCATAGCTTAAATCGCTATTATGCTATGTGGAATAAGCCCAGGCCTGAAGCTTCAGTTAAGGACAAGGCATTTGCTTCCAAGCTCTTGAGTGTTTCAGAAAAACAGCAATTTTACCTTGAATTGTCTTCAGTTGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGATCCATCAGATTTCACAACTATGGCCACAACATCTATAATACCTGTTGATCTGAATGCGTTTATACTTGGGATGGAACTTAATATTGCATTCTTTGCAAAAGTTACCGGAGATAGTAGCACTGCTGAACGCTTCCTAGAAGCCTCTAAGGCTAGAAAGAAGGCAATGAATTCAGTTTTTTGGAATGATGACAACAAACAATGGCTTGACTATTGGCTCTGTATTGACAAAAGTGAGGAAGCTCAGGTTTGGGAAGCTGAGCAGCAGAACAGAAGTATGTTTGCTTCCAACTTTGTTCCTCTGTGGATGGATCCTTTTCACTCAGATGCTTCAATTGTTGGTAGAATTGTTGAAAGCCTCAAAACATCTGGCCTACTTCGTGATGCTGGAATTGCTACTTCTTTGATAAATTCTGGACAACAGTGGGACTTTCCCAATGGTTGGGCTCCAATTCAGCACATGATAGTTGAAGGGCTGTTAAAATCTGGGTTGAAAGAAGCAAGGTCATTGGCTGAGGATATTGCAGTTAGGTGGATCAAAACCAACTATATTTCTTACCAGAAAACAGGCTTTATGCATGAAAAGTTTGATGTTGAGCATTGTGGAGAATTTGGAGGTGGGGGTTTGTATTTGCCTCAGACTGGTTTTGGCTGGTCGAATGGAGTAGTGTTGGCATTCTTGGAAGAGTTTGGATGGCCAAAAGATCGAAATATAGATTGTTG 1670 0.4186 MDSDHLSKPSDPLVSFLERVQEAAFNTLGANNCDPKTYVDLSLKFDLPATEEAFDKLPRSANGSVLVADFNCFIERYFDGAGDDLVFFEPEDYVPEPEGFLPKVENPKVREWALKVHSLWKSLSGKVSSGVKTQPQLHTFLPLPCSFIIPGSRFREVYYWDSYWVIRGLLVSKMYKTATAIVTNLIYLIEEYGFVLNGARAYYTNRSQPPLLSAMIYEVYNSTGDLELVKRALPALLKEYEFWNSDIHRVTIQDAQGYTHSLNRYYAMWNKPRPEASVKDKAFASKLLSVSEKQQFYLELSSVAESGWDFSTRWMRDPSDFTTMATTSIIPVDLNAFILGMELNIAFFAKVTGDSSTAERFLEASKARKKAMNSVFWNDDNKQWLDYWLCIDKSEEAQVWEAEQQNRSMFASNFVPLWMDPFHSDASIVGRIVESLKTSGLLRDAGIATSLINSGQQWDFPNGWAPIQHMIVEGLLKSGLKEARSLAEDIAVRWIKTNYISYQKTGFMHEKFDVEHCGEFGGGGLYLPQTGFGWSNGVVLAFLEEFGWPKDRNIDC 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00879 556 Gene3D - 15 554 IPR012341 GO:0005975
Bva03g00879 556 PANTHER TREHALASE 12 556 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 372 388 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 262 279 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 297 314 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 192 210 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 530 543 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 329 346 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PRINTS Glycosyl hydrolase family 37 signature 450 466 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 PANTHER TREHALASE 12 556 - -
Bva03g00879 556 Pfam Trehalase 33 547 IPR001661 GO:0004555|GO:0005991
Bva03g00879 556 ProSitePatterns Trehalase signature 2. 457 466 IPR018232 GO:0004555|GO:0005991
Bva03g00879 556 SUPERFAMILY Six-hairpin glycosidases 33 549 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00879 Bva-Chr3 5774040 5781379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00879 2 556 Trehalose Biosynthesis Gene Families AT4G24040 58.719 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00879 K01194 - gmx:547539 876.315