Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00876 ATGTCTTGTCGCGTCGTCGCAGAAAGTACATTCCCGTTAAGTCGAATGGATTCCACCGGTCACCCAAGCCACAGAGCCGCCGAGTCGCCGACGCTTGGGCAACTCCTCAAGCACGTCGGTGATGCGCGGAAGGAAGCCACCGGAGACGGCAGTGAAACGCCGCTCCACCATACACTTGACCTTGTGGATGCCAGTCCTCGCAAAGTTCCTTTCGTGCTTTCTTTCAGTAATCTCACTTACAGTGTGAAGGTTCGCCGGAAAATGAGCTTCTCAGCGTTTTTCCCGTGGCAGAGGAAGCGTCTTGGGGCAGGGCCGACCGCGTCAGAGACAATCATCGGAGAGAGTTTTTTTTCCAGGACCAAGACTTTACTAAATGATATATCCGGCGAAGCTCACGAAGGCGAGATTGTGGCCGTGATGGGAGCCAGTGGTTCGGGGAAATCGACTCTCATTGACGCCTTGGCTAATCGAATTGCCAAAGGGAGCTTGAAAGGAAGCGTCACTCTAAATGGCGAGAACTTGGAATCGCGACTCTTGAAGGTGATTTCAGCGTATGTAATGCAAGATGATCTTCTCTTCCCAATGCTCACCGTGGAAGAGACTCTGATGTTCGCTGCCGAGTTCCGATTACCCCGAACACTTTCCCAATCCAAGAAAAAACAGAGAGTTCAAGTTCTGATCGACCAACTCGGCCTCCGAAACGCCGCGAAAACAGTCATCGGCGATGAAGGCCACCGTGGCATCTCCGGCGGCGAACGCCGCCGTGTCTCCATCGGCATCGACATTATCCACGACCCAATCATGCTCTTCCTCGACGAACCCACCTCCGGGCTTGACTCCACCAGCGCATTCATGGTGGTAAAGGTTTTACAGAGAATCGCCCAAAGCGGAAGCATTGTGATCATGTCCGTACACCAGCCGAGTTCCCGAATCATGAGCCTTCTCGATCGCATGATTTTCCTGTCCAGAGGCCAAACAGTGTTCAGCGGCTCTCCTGTGCAGCTCCAGCGATTTTTTGCTGAATTCGGGCACCCGATACCCGAAACCGATAACCGAACCGAATTCGCGTTGGACTTGATCCGAGAACTGGAAGGCTCGCCGGGTGGAACTAAAAGCTTGGTGGAATTCAACAAGTCATGGCAGACCATGAAGCACCCCGGGAACGAAAACGACGCCGTCGCATCACTCCCTGGCGGCGAGCTGTCCTTAAAGGAAGCAATAAGCGCCAGCATTTCAAGAGGAAAATTGGTCTCCGGCGCCACAAACGGAACCTCGAGCCCATCTTCAATGGTGCCCACTTTCACAAACGCATTCTGGGTCGAGATAGCCACGCTTTCCAAACGCTCCATCACCAATTCACGCAGAATGCCTGAACTGTTCGGAATCCGGTTAGCTGCTGTTCTGGTCACCGGCTTCATCTTGGCCACTATTTTCTGGCAATTAGATAATTCCCCAAAGGGGATTCAAGAGAGACTCGGCTTCTTTGCATTCGCAATGTCCACCACGTTCTACACCACTGCCGACGCACTCCCCGTTTTCCTTCAAGAAAGATACATTTTCATGAGAGAAACTGCCTACAATGCTTACCGGAGATTCTCCTATCTCATCTCTCACGCTCTTGTATCTATACCATACTTGATGATCCTCGCCATGGCGTTCTCGGCAATCACCTTCTGGGCGGTGGGCCTAGACGGCGGCGCCTCCGGGTTCTTGTTCTATTTCTTAATCATCTTTGCCTCATTCTGGGCCGGAAACTCCTTCGTGACATTCCTCTCCGGCGTGGTGCCTCACGTGATGCTGGGATACACAATCGTGGTGGCGATTCTGGCCTATTTCTTGCTCTTCAGCGGCTTCTTCATCAACCGGGACCGAATCCCCAGCTACTGGATTTGGTTCCACTACATGTCTCTGGTGAAGTACCCGTACGAAGCTGTGCTGCAGAACGAGTTCGATGACCCGGTGAAATGCTTCACGAAGGGAGTGCAGATATTCGACAACACGCCGCTCGGGGCGGTGCCGGAGGCCATGAAGCTGAAGCTGTTGGAGAGCTTGAGCAACACGCTGGGGATGAAGATCACGAGCTCAACGTGTTTGACAACGGGCGCTGATATTCTGCAGCAGAATGGGATAACGGATTTGTCCAAGTGGAATTGTTTGTGGGTCACAGTTGCTTGGGGATTCTTGTTTAGGATTCTGTTTTACTTCACCCTGTTGCTCGGAAGCAAGAACAAGAGGAGGTG 2240 0.5259 MSCRVVAESTFPLSRMDSTGHPSHRAAESPTLGQLLKHVGDARKEATGDGSETPLHHTLDLVDASPRKVPFVLSFSNLTYSVKVRRKMSFSAFFPWQRKRLGAGPTASETIIGESFFSRTKTLLNDISGEAHEGEIVAVMGASGSGKSTLIDALANRIAKGSLKGSVTLNGENLESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSQSKKKQRVQVLIDQLGLRNAAKTVIGDEGHRGISGGERRRVSIGIDIIHDPIMLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSSRIMSLLDRMIFLSRGQTVFSGSPVQLQRFFAEFGHPIPETDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQTMKHPGNENDAVASLPGGELSLKEAISASISRGKLVSGATNGTSSPSSMVPTFTNAFWVEIATLSKRSITNSRRMPELFGIRLAAVLVTGFILATIFWQLDNSPKGIQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRFSYLISHALVSIPYLMILAMAFSAITFWAVGLDGGASGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYMSLVKYPYEAVLQNEFDDPVKCFTKGVQIFDNTPLGAVPEAMKLKLLESLSNTLGMKITSSTCLTTGADILQQNGITDLSKWNCLWVTVAWGFLFRILFYFTLLLGSKNKRR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00876 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 339 IPR027417 -
Bva03g00876 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 348 IPR003439 GO:0005524
Bva03g00876 746 SMART AAA_5 133 325 IPR003593 -
Bva03g00876 746 Pfam ABC-2 type transporter 442 650 IPR013525 GO:0016020|GO:0140359
Bva03g00876 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 25 738 - -
Bva03g00876 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 738 - -
Bva03g00876 746 Pfam ABC transporter 124 276 IPR003439 GO:0005524
Bva03g00876 746 ProSitePatterns ABC transporters family signature. 248 262 IPR017871 GO:0005524
Bva03g00876 746 Gene3D - 113 341 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00876 Bva-Chr3 5758278 5760746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00876 123 338 Calmodulin-binding Proteins AT2G36910 28.017 6.89e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00876 K05681 - gmx:100803658 1197.19