Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00868 ATGAATCCAAATAGAGACTCACACGATGCTGCCACAGCCGCCTCGGCGGCCACGACAACCATCTCCGCGAAGTCGGAGACAACTTCCGGATCTTTAGATTCGATTGATAATTTTACTGACGCCGACTTCGGTCTTACAATTGACGATGTCAATCACGATGCGCCGCCGCCAGCTCCCAACATTGTGATGTCCTCTAGGGATCCTGATTCTCTCTTCAGCGGTGGTGGCATCAgCTTTCTCTCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCTAGTTTCAAGGGTAAAAGGTCTTCCATGGAAGATTTCTTTGAGACAACGATATCGGAGGTTGATGGTCAGATGGTTGgcttttttggtgtttttgaTGGTCATGGAGGTTCCCGAGCTGCAGAATACTTGAAAAACAatctttttaagaatttgagTAGTCATCCTGACTTTATCAAAGATACAAAGACAGCTATTGTTGAAGCATTTAAACAAACGGATATTGACTACCTTAATGAGGAAAAGGGCCATCAGAGGGATGCTGGCTCCACTGCATCAACAGCTTTGTTGGTGGGGGACCGAATTCTCGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCTTCTAGAGCTGGTTTAGCTGTCCCATTGTCTATTGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAACAGGCTGGGGGTTTCATCATTTGGGCAGGGACATGGCGGGTTGGTGGTGTTCTTGCCGTTTCCCGTGCTTTTGGAGACAAACTTCTTAAGCCATACGTTGTTGCTGATCCAGAAATTCAGgaagaagaaattgacGGTGTAGATTTTCTAATAATCGCTAGTGATGGACTTTGGAATGTCATATCAAATAAGgaGGCTGTGTCTTTAGTGCAAAACATCACAGATGCAGAAGTGGCATCAAGAGAACTTATCAAAGAAGCTTATGCAAGGGGGAGCTCGGACAACATTACTTGTGTTGTTGTCCGATTTGATCTATCCTG 1013 0.4294 MNPNRDSHDAATAASAATTTISAKSETTSGSLDSIDNFTDADFGLTIDDVNHDAPPPAPNIVMSSRDPDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETTISEVDGQMVGFFGVFDGHGGSRAAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDIDYLNEEKGHQRDAGSTASTALLVGDRILVANVGDSRVVASRAGLAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFLIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00868 337 SUPERFAMILY PP2C-like 82 335 IPR036457 -
Bva03g00868 337 Pfam Protein phosphatase 2C 90 327 IPR001932 -
Bva03g00868 337 PANTHER ALPHABET, ISOFORM E-RELATED 51 337 - -
Bva03g00868 337 SMART PP2C_4 78 332 IPR001932 -
Bva03g00868 337 ProSiteProfiles PPM-type phosphatase domain profile. 89 334 IPR001932 -
Bva03g00868 337 Gene3D - 82 336 IPR036457 -
Bva03g00868 337 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Bva03g00868 337 SMART PP2C_SIG_2 101 334 IPR001932 -
Bva03g00868 337 CDD PP2Cc 88 334 IPR001932 -
Bva03g00868 337 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 51 337 - -
Bva03g00868 337 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00868 Bva-Chr3 5650337 5660427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00868 61 337 PP2C-type Phosphatase Gene Family AT1G43900 74.007 6.94e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00868 K17506 - gmx:100776867 522.702