Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00848 ATGCCAACCACAGCTGGGAAAGATCCTGTTCAAGTCATTAGAGAAGCACTTGCAAAAGCACTTGTGTTTTACTACCCATTTGCAGATGGAATCATTAATTGTCCCCTTTTGCTTATACAGGTTACACGGCTCAAGTGTGGTGGTTTTATCTTCGCCCTCCGTTTGAATCACACCATGAGCGATGCAGCTGGTCTTTCTCAATTCCTAAACGCAGTAGCTGAAATAGCTCGAGGTGCCAATCAACCTTCAATTACACCTATGTGGTCTAGAGAGCTCTTAAAAGCAAGGTACCCACCAAGAATCACATGCTCCCATCTTGAATATGAGCAGTTGCCTCAAATGGAGGGAACCATCATCTCACCAAATGACCTGCAACAacgttctttcttctttggacCGAGAGAGATAGCCACTATCCGTCGTCGTTTCATTCCGCATCACCTTGGTCCCTACACTACATTTGAAATCATCACTGCATGTCTTTGGCGTTGCCGCACAATAGCATTGCAAATGGACCCAAATGAAGAGGTTCGAATGATGGTTCTCGTCAATGGGCGTGCCATGTTTAAACCTCCAATACCTGTTGGTTTTTATGGGAATGCTTTTGTGTCTTCTTTATA 620 0.4306 MPTTAGKDPVQVIREALAKALVFYYPFADGIINCPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLSQFLNAVAEIARGANQPSITPMWSRELLKARYPPRITCSHLEYEQLPQMEGTIISPNDLQQRSFFFGPREIATIRRRFIPHHLGPYTTFEIITACLWRCRTIALQMDPNEEVRMMVLVNGRAMFKPPIPI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00848 195 Gene3D - 28 108 IPR023213 -
Bva03g00848 195 PANTHER ALCOHOL ACYLTRANSFERASE 32 194 - -
Bva03g00848 195 PANTHER ALCOHOL ACYLTRANSFERASE 3 31 - -
Bva03g00848 195 Gene3D - 109 195 IPR023213 -
Bva03g00848 195 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 32 194 - -
Bva03g00848 195 Pfam Transferase family 33 194 - -
Bva03g00848 195 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00848 Bva-Chr3 5486295 5488305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00848 30 194 Monolignol Biosynthesis Gene Families AT5G48930 26.471 5.43e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00848 K19861 - sind:105167775 241.506