Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00827 ATGgatcattttgaaaatgatggGGTGCCGATGCTGTTAGACACTCGTCCCCAACCATCTCAGGAACATGAACATTCTGAATTGCAGAGACAAGCAGCCAGTCCCCAAAGCGCATCAGTTTCCTTTCCAATGATCAATAGAGAGCCTTATGAGAGAGAAACTACACTTCTGGGACACACTGGTCCCCTAAGAAGTGAGAGAAAAACTCTCTTTGTGCAGATGAGTGGTCCATTATATGTCAACCATAGAACTGGAAACCCTTTCCAGCAGAATACTGGAGTTACAGTAAACATAGCAGCTGGGAGCAAGTCGGagcaattttgttctttcagcggtaacaatgaaaatgatttgCAGAGCAATTATGCTGGCAGGAATGAACATTTAGTGAGGTCTGGGCATCTGGGGATGTGTAATGATCCTTATTGTACAATTTGCCCTACTTGCTTCAAGGATACTCAACAAAGAAACTCAAAAGCTTCAAGTATATTTGATCCTAAGTTCCATAATGCCCTATATGATGATGCCAAGAGCTGTGCAAgaagattttcttctttcctgcTTTCATGTGTTCCTGGAGTTATGAACCCTCATACAAAAGTTGTACAAAAATGGAACAAGTTCTTTGCAATTTCTTGCTTGGTAGCAATTTTTGTGGatccattatttttcttcgtGTTCTCTGTACTGAAgGACAAGATCTGTATTGATATAAACCGGCCAATGACGATATCACTTGTTTTACTTAGAAGCATCACTGATTTTGTATGCCTCCTGAATGTTCTTCTTCAGTTTAGGCTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCAGGAGCGTTAGTTGACCATCCCAAGAAAATTGCTCTTCATTACCTCCAGggtttttttcttattgactTACTAGTTGTATTTCCACTTCCTCAGatcataatatatattgttctaTCAAAATCAGTGGTGTCATTTGGAGCAAATAATGCTAAGGATGTTCTGCGTGCATCAATCCTTGCTCAATATATTCCCAGATTGTTTAGATCTCTGCCTCTGCTAATTGGTCAGTCACCAAGTGGATTCATATTTGAATCAGCCTGggaaaatttcttcataaatCTTCTCACCTATATGCTATCTGTCCATCTTGTTGGATCTTGCTGGTACCTCTTTGGTCTACAGAGGGTTAGTCAATGCCTGCTAGATGCCTGCCATGGAGCTTTATTTCCTGATTGCACTAAATTGATTGATTGTCAACATGGTCGTGCTGAAAGACTTCAGAGTGACCAGTGGAATTGGAAAACCAATACTAATGCAAATGCATGTTTGACAGAAAATGGTTTTCCTTACGGGATCTATGTCAGAGCAGTCAACCTTTCCATTAGCTCTAATGTGATCAccagatatatatattcgtCATTTTGGGGATTCCAGCAAATCAGTACTCTATGTGGTAGTCTAACACCAAGCTATTATGTTTGGGAGGTCATTTTCTCAATGGCCATCATAGGATTGGGACTTTTGCTTTTCGCTCTTCTCATTGGAAACATGCAAAACTTTCTTCAGGCTCTTGGAAAGAGGAGACTAGAAATGTCACTTAGACGCCGTGATGTTGAGCAATGGATGCGCCACCGGCGCTTACCACATGAACTAAGAAGGAGAGTACGAGAGGCTGAAAGGTTTTGCTGGGCTGCGACAAGAGGGGTGAATGAAGAAATTCTTCTGGAGAATTTGCCAGAAGACCTCCAGAGAGACATAAGACGCCATCTCtttgaatttgttaaaaagGTTCGAATATTTTCCCTTATTGACGAGCCTATTTTAGATGCCATCTGTGAGAGGCTAAGACAAAAGACATACATCAAAGGAAGCAGAATCATGTATCCGGGAGGTCTGGTAGAAAAGATGATCTTTGTTGTCCGTGGAAGATTGGAAAGTGTTGGAGAAGATGGAATTAGAGTTTCCTTAACTGAAGGGGACGTTTGCGGTGAAGAACTTCTTACATGGTGTCTTGAGCATTCTTCTGTAAACAAAGATGGTGCAAAAGTAAAGCTTCCAGGACAGCATTTACTTAGCGATAGGATGGTAAAGTGCTTAACAAATGTGGAGGCATTTTCCCTCCGGGCTGCAGACCTTCAAGAAGTCACCAGCCTTTTTACAAGACTCCTGCGAAATCCACGCGTTCAAGGAGCTATACGGTATGAATCTCCATATTGGAGATCTTACGCTGCAATCCGCATTCAAGTTGCATGGAGATATAGGATGAGAAGGCGTCTAAGTCATTATGATAGCTG 2291 0.392 MDHFENDGVPMLLDTRPQPSQEHEHSELQRQAASPQSASVSFPMINREPYERETTLLGHTGPLRSERKTLFVQMSGPLYVNHRTGNPFQQNTGVTVNIAAGSKSEQFCSFSGNNENDLQSNYAGRNEHLVRSGHLGMCNDPYCTICPTCFKDTQQRNSKASSIFDPKFHNALYDDAKSCARRFSSFLLSCVPGVMNPHTKVVQKWNKFFAISCLVAIFVDPLFFFVFSVLKDKICIDINRPMTISLVLLRSITDFVCLLNVLLQFRLAYVAPESRVVGAGALVDHPKKIALHYLQGFFLIDLLVVFPLPQIIIYIVLSKSVVSFGANNAKDVLRASILAQYIPRLFRSLPLLIGQSPSGFIFESAWENFFINLLTYMLSVHLVGSCWYLFGLQRVSQCLLDACHGALFPDCTKLIDCQHGRAERLQSDQWNWKTNTNANACLTENGFPYGIYVRAVNLSISSNVITRYIYSSFWGFQQISTLCGSLTPSYYVWEVIFSMAIIGLGLLLFALLIGNMQNFLQALGKRRLEMSLRRRDVEQWMRHRRLPHELRRRVREAERFCWAATRGVNEEILLENLPEDLQRDIRRHLFEFVKKVRIFSLIDEPILDAICERLRQKTYIKGSRIMYPGGLVEKMIFVVRGRLESVGEDGIRVSLTEGDVCGEELLTWCLEHSSVNKDGAKVKLPGQHLLSDRMVKCLTNVEAFSLRAADLQEVTSLFTRLLRNPRVQGAIRYESPYWRSYAAIRIQVAWRYRMRRRLSHYDS 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00827 763 SUPERFAMILY cAMP-binding domain-like 525 719 IPR018490 -
Bva03g00827 763 CDD CAP_ED 598 714 IPR000595 -
Bva03g00827 763 Gene3D - 200 523 - -
Bva03g00827 763 SUPERFAMILY Voltage-gated potassium channels 197 521 - -
Bva03g00827 763 Gene3D Jelly Rolls 596 720 IPR014710 -
Bva03g00827 763 Gene3D Helix hairpin bin 525 590 - -
Bva03g00827 763 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 762 - -
Bva03g00827 763 MobiDBLite consensus disorder prediction 1 39 - -
Bva03g00827 763 Pfam Ion transport protein 207 526 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva03g00827 763 ProSiteProfiles cAMP/cGMP binding motif profile. 598 666 IPR000595 -
Bva03g00827 763 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 5 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00827 Bva-Chr3 5160311 5172905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00827 3 676 Ion Channels AT3G17700 59.647 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00827 K05391 - qsu:112012074 1038.87