Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00826 ATGGCTCCAGTCAAGGTGGACAGTTCTAAAAAGGCGGATCCTAAAGCACAGGCCTTGAAGACAGCCAAGGCTGTGAAAACAGGTGGCCAAGTGTTTaagaagaaagccaagaaGATCAGGACATCTGTCACATTTCATCGGCCAAAGACTTTGAAGAAGGAAAGGAATCCCAAGTATCCACGCATTAGTGCACCTCCAAGAAACAAGTTGGACCATTATCAGATTCTTAAATTTCCACTAACAACTGAATCTGCCATGAAGAAGATTGAGGATAACAATACGCTGGTTTTCATTGTTGACATCCGTGCTGACAAGAAGAAGATTAAGGATGCAGTGAAGAAGATGTATGAAATCCAAGCAAAAAAAGTGAACACTTTGATCAGGCCTGatggaacgaagaaagcctATGTTAGGTTGACTCCAGATTATGATGCCTTGGACGTGGCTAACAAAATTGGCATCATCTA 467 0.3919 MAPVKVDSSKKADPKAQALKTAKAVKTGGQVFKKKAKKIRTSVTFHRPKTLKKERNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYEIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00826 155 MobiDBLite consensus disorder prediction 1 24 - -
Bva03g00826 155 TIGRFAM uL23_arch: ribosomal protein uL23 79 155 IPR019985 GO:0003735|GO:0005840|GO:0006412
Bva03g00826 155 Hamap 50S ribosomal protein L23 [rplW]. 75 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bva03g00826 155 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bva03g00826 155 Pfam Ribosomal protein L23 75 137 IPR013025 GO:0003735|GO:0005840|GO:0006412
Bva03g00826 155 ProSitePatterns Ribosomal protein L23 signature. 133 148 IPR001014 -
Bva03g00826 155 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 155 - -
Bva03g00826 155 Pfam Ribosomal protein L23, N-terminal domain 15 65 IPR005633 -
Bva03g00826 155 Gene3D - 36 155 IPR012677 -
Bva03g00826 155 MobiDBLite consensus disorder prediction 46 66 - -
Bva03g00826 155 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 72 148 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00826 Bva-Chr3 5148485 5150619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00826 1 155 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 80.645 5.00e-69 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00826 K02893 - gmx:100777933 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00826 03 5148485 5150619 Bva03g00826 03 5148485 5150619 ECH