Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00823 ATGGCAATCTATAGAATTGCAATTGGAAACCCAGGAGAGGCAAGCCAACCTGATGCAATTAGAGCAGCATTTGCAGAGTTCTTCTCCATGCTCATCTTTGTCTTTGCTGGTCAAGGTTCTGGCTTGGCTTATAACAAATTAACAGATGGTTCTAGCACGGCTACTGGCCTTATAGCAGCATCATTATCTCATGCATTGGCGCTCTTCGTGGCGGTATCTGTTGGGGCAAACATTTCTGGAGGTCATGTAAATCCTGCTGTCACATTTGGTGCCTTCATTGGAGGAAACATAACTCTATTGAGATCTATTCTCTATTGGATTGCACAATTGCTTGGATCAGTTGTAGCATGCTTTCTACTCAAATATGCTACTGGTGGATTGGAAACCCCAGCTTTTGCACTATCATCAGGAGTGTCTGTATGGAATGCTCTACTTTTTGAAATTGTGATGACTTTTGGATTGGTATACACAGTTTATGCCACAGCAGTGGATCCCAAGAAGGGCAATGTGGGAATTGTTGCCCCAATTGCCATAGGGTTCATTGTGGGTGCCAACATCTTAGTTGGTGGTGCCTTTGATGGTGCATCCATGAACCCAGCTGTGTCATTTGGCCCTGCTGTGGTTAGCTGGTCATGGAACCATCACTGGGTCTATTGGCTTGGTCCTCTCATTGGTGCAACCATTGCAgctattatttatgataatatcTTCATTGGAGAGGATGGTCATGAACCTCTTGTCCACAGTGACTTCTA 755 0.4384 MAIYRIAIGNPGEASQPDAIRAAFAEFFSMLIFVFAGQGSGLAYNKLTDGSSTATGLIAASLSHALALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRSILYWIAQLLGSVVACFLLKYATGGLETPAFALSSGVSVWNALLFEIVMTFGLVYTVYATAVDPKKGNVGIVAPIAIGFIVGANILVGGAFDGASMNPAVSFGPAVVSWSWNHHWVYWLGPLIGATIAAIIYDNIFIGEDGHEPLVHSDF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00823 251 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 ProSitePatterns MIP family signature. 82 90 IPR022357 -
Bva03g00823 251 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Bva03g00823 251 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 251 - -
Bva03g00823 251 PANTHER AQUAPORIN-8 1 251 IPR034294 -
Bva03g00823 251 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva03g00823 251 SUPERFAMILY Aquaporin-like 16 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00823 Bva-Chr3 5124284 5126307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00823 1 251 Major Intrinsic Protein MIP AT4G01470 81.746 1.37e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00823 K09873 - gmx:100788583 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00823 03 5124284 5126307 Bva03g00823 03 5124284 5126307 ECH