Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00806 ATGTCAGAAGATGTTCCTTCAACTGCAATTGCCAAGATGAGGAATGCTCTTCTCCCGTCGTGGCCTTCACCGATTCACTGCCACGGAAACAATATTGAACACcaaatggaaaatttgatgGCTTCCACGCATATGGACGACCTTATTCATTTTCACAACAGTGCCTGCTATATGGGAtctaaaatattcaacaaTGGCAGCCAATTGGGTAATGGAAGCGACACAATGTATACACAGTCTCATTCCTTTATTGACGATTACAATCATCATTCAGGTAGTCTACATGGTATCTCCAACAGCAAAGACGTTCATATGCAATCATTTTTGCTTAGCAagcaaaaatcaatttctcaATATGAAGGAGATAGAGGAAACGAGAGAAAACGTCCACATGAGTTCATTGACAATATGTCAATGTTCaagaagttgaaaaataaTCCGAAAAACAAAATGCCACCAATCTTGGAGCCAAAATGGTATCAAACTTTGGAGTATTCACAGGAAATCCATGGTCACAAACTGCAGTTGCCCGTGAGAAGAAGACAAAAGCTtactgataaaataaaaagtctaCAAAAACTGGTGTCGCCTTATGGGAAAACTGACACTGCCTCAGTTCTTCACGAGGCTTCTCTCTATATCAAGCTTCTTCAAGAACAAATTCAGaatttGTACCAGATGCTGGGTTTCTCATATACTACTGTTAAAACCCTTCATACAGAGGGatgtagagagagagaggttgaTCTAAGAAGCAAAGGACTTTGTTTGGTTCCTATATCAATCACACAGAAAGTAACAATAGAAGACAAGGTTGACCATGATGCCAACTCAAAGAGAATTTTCCtaccaagaaaatttta 863 0.3499 MSEDVPSTAIAKMRNALLPSWPSPIHCHGNNIEHQMENLMASTHMDDLIHFHNSACYMGSKIFNNGSQLGNGSDTMYTQSHSFIDDYNHHSGSLHGISNSKDVHMQSFLLSKQKSISQYEGDRGNERKRPHEFIDNMSMFKKLKNNPKNKMPPILEPKWYQTLEYSQEIHGHKLQLPVRRRQKLTDKIKSLQKLVSPYGKTDTASVLHEASLYIKLLQEQIQNLYQMLGFSYTTVKTLHTEGCREREVDLRSKGLCLVPISITQKVTIEDKVDHDANSKRIFLPRKF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00806 287 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 270 - -
Bva03g00806 287 CDD bHLH_AtbHLH_like 179 224 IPR045239 -
Bva03g00806 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Bva03g00806 287 PANTHER TRANSCRIPTION FACTOR BHLH112 41 270 - -
Bva03g00806 287 Pfam Helix-loop-helix DNA-binding domain 179 218 IPR011598 GO:0046983
Bva03g00806 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 228 IPR036638 GO:0046983
Bva03g00806 287 Gene3D - 178 231 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00806 Bva-Chr3 5023103 5026977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00806 178 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 49.000 5.70e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva03g00806 HLH 0.00024 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00806 - - ccaj:109812405 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00806 03 5023103 5026977 Bva03g00806 03 5023103 5026977 ECH