Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00803 ATGAGTCTGCTAAGCAACTCTCTATCTCTTGTTCTTCTGCTTGCAGTTTCTGTATCTTTGCTTCTCTTAAACCCAAGCCAATATTATCTCAACATTTTCACTGATCACACTCTAACTACATTGTCATCTTCATTACCTGCATTACTTTTTCCATACAAGTTTGGTCTGGCGTCGCCATCATCACAAGAAACGCCGGCCCGATTCCGGCAATGCTGAAAGATTTTTCCTAAGTTTTGGCATGGCAAATTCATCTTTCCTTTGAAAATTTCTATGGCAAATCCAGTACCCCAAGGACAAAGGTTCATAAACGGTGCTGTCACCGCTCATGGTAGAGCTTCCCTCCATGAAAATTCAGGGTTTGCATTTGTCAACTGCAGCATTGGAGGCAATGGCAGAATATGGTTAGGTCGAGCATGGCGGCCATATTCCCGCGTGGCTTTTGCCCTAACAACAATGTCGGATATCATTGCCCCTGAGGGTTGGAATGATTTCAACTACCCTACAAGAGATCAGACTATATTCTATGGAGAATACAATTGCAGAGAGCCTGGGGCTAATATGGGTGCAAGAGCTCCTTATGTTCAGAGATTAAACGACACACAAGCTTTGCCTTTCCTTGATACAACTTTCATTGATGGAGATCAATGGCTGCAGGCCAACATATA 665 0.4331 MSLLSNSLSLVLLLAVSVSLLLLNPSQYYLNIFTDHTLTTLSSSLPALLFPYKFGLASPSSQETPARFRQCKIFPKFWHGKFIFPLKISMANPVPQGQRFINGAVTAHGRASLHENSGFAFVNCSIGGNGRIWLGRAWRPYSRVAFALTTMSDIIAPEGWNDFNYPTRDQTIFYGEYNCREPGANMGARAPYVQRLNDTQALPFLDTTFIDGDQWLQANI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00803 220 Gene3D - 82 220 IPR012334 -
Bva03g00803 220 PANTHER PECTINESTERASE 8-RELATED 88 218 - -
Bva03g00803 220 SUPERFAMILY Pectin lyase-like 102 218 IPR011050 -
Bva03g00803 220 Pfam Pectinesterase 102 213 IPR000070 GO:0030599|GO:0042545
Bva03g00803 220 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 88 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00803 Bva-Chr3 4978269 4981160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00803 88 217 Carbohydrate Esterase AT1G05310 69.231 2.71e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00803 - - bhj:120090174 228.409