Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00801 ATGAAGCAGCTTGTGGTGTTACGTCTTTATGAAAACAAGTTGTCTGGGGATATTCCCTTGGAGCTTGGGGAATGTTCAGGATTAAAAGGACTTTTGTTGGGTGGAAACTTCTTCCAAGGAAGTATTCCTTCATCCCTTGGCTCTTTAAAATCCCTGGAATTCTTGGATCTTTCTAGGAACAACTTATCAGGCACAATCCCTGGTGAATTgagaaaactttcaattttgaaGAGCTTGAACTTGTCTTTCGACCATCTGCATGGTGAGATTCCAACTGGTGGGGTGTTTAGTAACATTACTGGACTTTCACTCTACGGAAATGAGGATCTTTGTGGTCGGTTACCTGAAATAAAACTGCCTGCACGCCCTATCAAGCACTTGAAGAAACCCAAGAAGCCTCTACATTTGAAAGTTATCCTCATTATTGTAGTTACTGGGgagtttctttgttctttagtcttgatcattatattttatatgatcagaaaaccaaaaaggtTATCCTCAGCCAATTCTTTTGAAGATTGGCTCTTGATGGTTTCTTATTGTGAGCTTTATGGATCAACCAGTGGATTTTCTTCAACCAATTTAATTGGCACAGAGAGTTTTGGCTCTGTATACAAAGGAACTCTTAAATGTTTCAACAAACCTATTGCTGTGAAGGTGCTAAATCTTCAAATACATGGGGCATCAAAGAGTTTTGTGGCTGAGTGTAGAGCTTTGGCTAGAGTTCGACATAGAAATGTTGTGAAAATCCTTACTTGTTGCTCGAGTATTGACTACAAGGGTGCAGATTTCAAAGCACTGATCTTTGAATTCATGCCTAATGGAAGTCTGGAAAATTGGTTGCACAAGATCAGCAGCACTCTGAGTCAGAGAACAAAAATCTG 890 0.3697 MKQLVVLRLYENKLSGDIPLELGECSGLKGLLLGGNFFQGSIPSSLGSLKSLEFLDLSRNNLSGTIPGELRKLSILKSLNLSFDHLHGEIPTGGVFSNITGLSLYGNEDLCGRLPEIKLPARPIKHLKKPKKPLHLKVILIIVVTGEFLCSLVLIIIFYMIRKPKRLSSANSFEDWLLMVSYCELYGSTSGFSSTNLIGTESFGSVYKGTLKCFNKPIAVKVLNLQIHGASKSFVAECRALARVRHRNVVKILTCCSSIDYKGADFKALIFEFMPNGSLENWLHKISSTLSQRTKI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00801 296 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 290 - -
Bva03g00801 296 SUPERFAMILY Protein kinase-like (PK-like) 168 292 IPR011009 -
Bva03g00801 296 SUPERFAMILY L domain-like 2 111 - -
Bva03g00801 296 Pfam Leucine rich repeat 27 86 IPR001611 GO:0005515
Bva03g00801 296 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 290 - -
Bva03g00801 296 Pfam Protein tyrosine and serine/threonine kinase 196 291 IPR001245 GO:0004672|GO:0006468
Bva03g00801 296 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
Bva03g00801 296 Gene3D Transferase(Phosphotransferase) domain 1 181 296 - -
Bva03g00801 296 ProSiteProfiles Protein kinase domain profile. 192 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00801 Bva-Chr3 4962463 4963353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00801 3 91 Receptor kinase-like Gene Family AT5G20480 41.573 1.85e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00801 PK_Tyr_Ser-Thr 2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00801 - - ccaj:109813865 317.005