Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00800 ATGCACATGATGGACATATTCAGTATTAGCAAAAGTCTTCATCACAGTGCCCTGCTTAAGTTAATTCTCTGCATTATAGTTTCACAAACCTTGGTGAACAAGCCAACTACTAGTGCTGGCCTGCGCTTGGGATCAGAGACTGATAGACTTACCCTACTGGCCTTGAAGGACAAACTGACTAAAGGCTTGCCTGATGCTCTCTCTTCATGGAATGAGTCTATCCACTTCTGTGAGTGGCAAGGTATTATATGCAGTTCCCGTCACGTGAGAGTTGCTGTGTTGTATTTGACAAACCAAAACATGGGCGGTACCATTTCACCTGCCTTGGGAAATTTGACATTCCTTAAATTGTTGAATCTTTCTCTTAACAACTTACATGGTGGGATTCCCAAAGAAGTTGGCCGTCTAAAGAGGTTGCAGCGTATCAACTTAGGTGGAAATAATCTTGATGGTGAGATTCCTGCAGAGCTTGCAAACTGCTCAAACCTTGTGGTTATTAACTTTCTTCAAAATAACCTCACAGGTAAAGTTCCCTTCGGGCTAGGATCTATGAAGTATCTCACTCGTTTGACTCTTGGTGTCAATAAGATAGTTGGAACTATACCAACTTCCTTGGGAAACCATTCATCATTGGAACTTCTGGATCTTTCATACAATCATTTGGAAGGAAGTTTACCTGATTCTCTAGGTGGGCTGTCAAATCTTCGGTTTCTTTTTGTGGGAGTGAATTTTTTGTCTGGTATAATTCCTCCATCCCTCTACAATCTTTCAAACATGCAAAACATTGATGTGGCTGTAAACCAGTTTGTTGGTAGCCTTCCATCAAATATAGACATTGCTTTTCCTaggcttgaatttttttattttgacctGAATAGCTTTACAGGAACCATTCCTTCTTCCATAGGCAACATCTCCAATTtgcaaaaaattgatattggTAATTGCCGTTTTAGTGGACCAACTCCTGCTACTTTTGGAAGGCTGATAAACcttcaatatttaaatattgaattcAATAGTTTAGGGAATGGAAAAGCCAGTGATTTGGATTTCCTTTCATCTTTAACCAACTGTAGTCAATTGAATACGCTGATTTTCCCGGGCAACAGATTTGGTGGAGCTCTGACGGATTTAATTGGCAATTTTTCTACTCGTCTCAATACCCTTCTTATGGGATCTAATCAGATATCTGGAACCATACCCGAAACAATTGGGCGGCTAGTTGGTTTAATTTCTCTTCGTATGGAAGATAACTTGCTTGAGGGTACAATACCAACTTCAATTGGAAAACTTACAAATCTTGGAGAATTGGTCTTTTATTTAAACAGATTATCTGGTAATATCCCTTCTTCCATTGGAAATCTTAGTATGCTATTTGATCTTGAATTGGACACTAATAGTTTAGAAGGAGGCATTCCACTTTCCTTCAGCCACATCGCAAATATGCAGCATCTGTATCTTTATCAAAACAACTTGAGTGGTAATATACCCCACCAAATATTTTCTCGTCAACaaagtttaataaatattgactTGTCCCACAATTCCTTTACCGGTTCTGTTCCATCAGAATTTGGTAAGATGAAGCAGCTTGTGGAGTTATATCTTCATGAAAACAAGTTGTCTGGCGATATTCCCTCAGAGCTTGGTGAATGTTCAGGGTTAGAAAACCTTGTAATGAGTGGAAACTTCTTCCAAGGAAGTATTCCTTCATCCTTTGGCTCTTTAATCTCTCTGGAAATCTTAGATCTTTCTAGGAACAACTTATCAGGCCCAATCCCAGGTGAACTGAGAAAACTTTCAATGTTGAAGAGCTTGAACTTGTCTTTCAACCATCTGCATGGTGAGATTCCAATTGCAGGAGTGTTTAGTAACATTACTGGACTTTCACTCTATGGAAATGATTATCTTTGTGGTGGGATACCTGAATTGAAATTGCCTGCATGCCCTGTAATACACTTGAAGAAACCCAAGAAGCCTCTACATTTGAAAGTTATCCTCATTATTGTACTTACTGGCGTGTTTCTTTGTTCTATAGTTTccatcattatattatatatgaccaaaaaaccaaaaaggttATCCACTACCGCTTCTTTGGAAAATAGGTTCTTGATGGTTTCTTATGGCGAACTTCATGAAGCAACAAATGGATTTTCTTCAACCAATTTGATTGGTATAGGGAGTTTTGGCACTGTATTTAAAGGAACTTTTGCCCATTTCAACAATCCTATTGCTGTGAAGGTGCTAAATCTTCAAACACGTGGGGCGTCAAAGAGTTTTGTGGCTGAATGTAGAGCTTTGTGTAGAGTTCGACATAGAAATCTTGTGAAGATTCTAACTTGTTGCTCAAGTATAGACTACAAGGGTGCAGATTTCAAAGCACTAGTGTTTGAATTCATGCCTAATGGGAGTCTGGAAAATTGGTTGCACAGTGATGAACAATCTGAGTCAGAGAATCAAAATCTAAACCTCATACAAAGGTTAGATGTAGCCATTGATGTCGCTCAAGCGCTGGATTATCTTCACAATGATTCTGAGGAAGTAATTGTTCATTGTGACATAAAGCCCAacaacatttttcttgataatgACATGGTTGCTCACTTGGGAGACTTTGGGCTAGCTAGGATCCTTGATGAGGCTAAGGGCAATGGCAGTAGAGAGCAAGCCACATCCTCAACGGTAAAGGGAACCATTGGATATATTCCCCCAGAATACGGAATGGGTGGGGCAGTTTCAGCTGTCGGTAATATTTATAGCTATGGAATTCTTTTGCTGGAGATGATCGTGGGAAGGAAACCAACTGATAGCATGCTCAGTGAGAATCTGAGCCTTCACATGATGTGTAAGATGGCATTGCCAAAAGGACTTATTGAGCAAGTTGATCCGCGTTTGCTAGAACAATCTAACGATAAGATTAGGGAGGCTCTGGTTTCCTTAGCTAGGGTTGGAGTTGCATGTTCTTCAGAATTGCCTAGTGAACGAATGAGCATCAAAGATGTTATAGTGGAGTTGCTTGCAATTAAAAGGAAGCTGTCTCATCCACAAGGTATCACAATTGTCACCCAAAATTA 3080 0.3831 MHMMDIFSISKSLHHSALLKLILCIIVSQTLVNKPTTSAGLRLGSETDRLTLLALKDKLTKGLPDALSSWNESIHFCEWQGIICSSRHVRVAVLYLTNQNMGGTISPALGNLTFLKLLNLSLNNLHGGIPKEVGRLKRLQRINLGGNNLDGEIPAELANCSNLVVINFLQNNLTGKVPFGLGSMKYLTRLTLGVNKIVGTIPTSLGNHSSLELLDLSYNHLEGSLPDSLGGLSNLRFLFVGVNFLSGIIPPSLYNLSNMQNIDVAVNQFVGSLPSNIDIAFPRLEFFYFDLNSFTGTIPSSIGNISNLQKIDIGNCRFSGPTPATFGRLINLQYLNIEFNSLGNGKASDLDFLSSLTNCSQLNTLIFPGNRFGGALTDLIGNFSTRLNTLLMGSNQISGTIPETIGRLVGLISLRMEDNLLEGTIPTSIGKLTNLGELVFYLNRLSGNIPSSIGNLSMLFDLELDTNSLEGGIPLSFSHIANMQHLYLYQNNLSGNIPHQIFSRQQSLINIDLSHNSFTGSVPSEFGKMKQLVELYLHENKLSGDIPSELGECSGLENLVMSGNFFQGSIPSSFGSLISLEILDLSRNNLSGPIPGELRKLSMLKSLNLSFNHLHGEIPIAGVFSNITGLSLYGNDYLCGGIPELKLPACPVIHLKKPKKPLHLKVILIIVLTGVFLCSIVSIIILYMTKKPKRLSTTASLENRFLMVSYGELHEATNGFSSTNLIGIGSFGTVFKGTFAHFNNPIAVKVLNLQTRGASKSFVAECRALCRVRHRNLVKILTCCSSIDYKGADFKALVFEFMPNGSLENWLHSDEQSESENQNLNLIQRLDVAIDVAQALDYLHNDSEEVIVHCDIKPNNIFLDNDMVAHLGDFGLARILDEAKGNGSREQATSSTVKGTIGYIPPEYGMGGAVSAVGNIYSYGILLLEMIVGRKPTDSMLSENLSLHMMCKMALPKGLIEQVDPRLLEQSNDKIREALVSLARVGVACSSELPSERMSIKDVIVELLAIKRKLSHPQGITIVTQN 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00800 1026 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 46 1015 - -
Bva03g00800 1026 SUPERFAMILY Protein kinase-like (PK-like) 696 1007 IPR011009 -
Bva03g00800 1026 ProSiteProfiles Protein kinase domain profile. 720 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00800 1026 Gene3D Phosphorylase Kinase; domain 1 683 801 - -
Bva03g00800 1026 SUPERFAMILY RNI-like 94 398 - -
Bva03g00800 1026 SUPERFAMILY L domain-like 384 640 - -
Bva03g00800 1026 SMART serkin_6 720 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00800 1026 SMART LRR_typ_2 209 231 IPR003591 -
Bva03g00800 1026 SMART LRR_typ_2 136 160 IPR003591 -
Bva03g00800 1026 SMART LRR_typ_2 529 553 IPR003591 -
Bva03g00800 1026 SMART LRR_typ_2 577 600 IPR003591 -
Bva03g00800 1026 SMART LRR_typ_2 601 626 IPR003591 -
Bva03g00800 1026 SMART LRR_typ_2 480 504 IPR003591 -
Bva03g00800 1026 Pfam Leucine rich repeat N-terminal domain 46 85 IPR013210 -
Bva03g00800 1026 ProSitePatterns Protein kinases ATP-binding region signature. 726 749 IPR017441 GO:0005524
Bva03g00800 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Bva03g00800 1026 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Bva03g00800 1026 Pfam Leucine rich repeat 491 542 IPR001611 GO:0005515
Bva03g00800 1026 Pfam Leucine rich repeat 186 241 IPR001611 GO:0005515
Bva03g00800 1026 Gene3D Ribonuclease Inhibitor 346 651 IPR032675 -
Bva03g00800 1026 PRINTS Leucine-rich repeat signature 577 590 - -
Bva03g00800 1026 PRINTS Leucine-rich repeat signature 211 224 - -
Bva03g00800 1026 Gene3D Transferase(Phosphotransferase) domain 1 802 1020 - -
Bva03g00800 1026 Gene3D Ribonuclease Inhibitor 280 345 IPR032675 -
Bva03g00800 1026 Gene3D Ribonuclease Inhibitor 170 279 IPR032675 -
Bva03g00800 1026 PANTHER LRR RECEPTOR-LIKE KINASE 46 1015 - -
Bva03g00800 1026 Gene3D Ribonuclease Inhibitor 47 162 IPR032675 -
Bva03g00800 1026 Pfam Protein kinase domain 722 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00800 Bva-Chr3 4954432 4957788 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00800 46 1014 Receptor kinase-like Gene Family AT3G47570 43.655 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00800 Pkinase 1.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00800 - - gmx:100777490 1114.75