Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00799 ATGCCTAATGGGAGTTTGGAGAACTGGTTGCACAATGAGGAACAGCCAGATTCAGGGGATCTAAATCTAAACCTCAGACAAAGGTTAAATGTAGCTATTGATATAGCTCAAGCGTTGGATTATCTTCACAGTGGTTGTATGGAAATAATTGTTCATTGTGACATAAAACCCAGCAACATTTTTCTTGATGACGACATGGTTGCTCACTTGGGAGACTTTGGGCTAGCTAGGCTCCTTGACGAGGATAAGGGCAATGGCAATAGAGAGCAAGCCACATCCTCTTCAGTAAAGGGAACCATTGGATATATTCCCCCAGAATATGGAATGAGTGATACAGTTTCAGCTGAGGGTGATATTTACAACTATGGAATTCTTTTGTTAGAGATGATCATAGGAAAGAAACCAACTGATAACATGTTCAGTGAGAATTTGAGCCTTCATAATATGTGTAAGATGGCATTGTCAGAAAGACTTCTTGAGCAAATTGATCCACTTTTGCAAGTACAATCTAATAATACAATTAGGGAGGCTCTAGTGTCCTTTGCTAGGATTGGAGTTGCATGTTCTTCAGAAATTCCCAGTGAACGAATGGGCATAAAAGATGTTATAATGGAGTTACTTGCGATCAATAGGAGGCTGTCTTTTCTACAAGGTATCAAAGTTGTCACCCAAAATTA 677 0.3944 MPNGSLENWLHNEEQPDSGDLNLNLRQRLNVAIDIAQALDYLHSGCMEIIVHCDIKPSNIFLDDDMVAHLGDFGLARLLDEDKGNGNREQATSSSVKGTIGYIPPEYGMSDTVSAEGDIYNYGILLLEMIIGKKPTDNMFSENLSLHNMCKMALSERLLEQIDPLLQVQSNNTIREALVSFARIGVACSSEIPSERMGIKDVIMELLAINRRLSFLQGIKVVTQN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00799 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Bva03g00799 225 SUPERFAMILY Protein kinase-like (PK-like) 1 206 IPR011009 -
Bva03g00799 225 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 217 - -
Bva03g00799 225 SMART serkin_6 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00799 225 Pfam Protein kinase domain 2 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00799 225 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 217 - -
Bva03g00799 225 Gene3D Transferase(Phosphotransferase) domain 1 1 218 - -
Bva03g00799 225 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00799 Bva-Chr3 4944558 4948503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00799 1 213 Receptor kinase-like Gene Family AT3G47580 44.954 4.81e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00799 Pkinase 2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00799 - - ccaj:109813865 265.774