Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00792 ATGAAGCAGCTTGGAAAGTTATATCTTCAGGAAAACTTCTTGTCTGGGGGTATTCCCGCAAAGCTTGGTGAATGTTCTGGGTTAGAAGAACTTGTAATGAGTGGTAAACTATTGAATGGAAGCATCCCTTCATCTTTTGGCGCTTTAAAATCCCTAAAACTCTTAGAACTTTCTAGGAACAACTTATCAGGCACAATCCCTGCTGAACTCAGAAATCTTTCAATGTTGAACAACTTAAACTTGTCTTTCAACCATCTTCATGGTGAGATTCCATTTGGGGGAGTGTTTAGTAACATCACTGCACTTTCACTCTATGGAAATGAGGACCTTTGTGGTGGGATTCCTCAACTGAAACTGCCTGCATGCCCTGTCATACACTTGAAAAAAGCCAAGAAGCGTCTACATTTGAAAGTTATCCTCATTATTGTAGTTACTGGGGCGTTCCTGTGTTCTGTAATTTCcatcattatattatacatgaccaaaaaaccaaaaagGGGGTTTTGGCTCTGTTTACAAAGGAACTCTGAGCTATTTCAGCAGACCTATTGCTGTGAAAGTACTAAATCTTCAAACACTGGGTCATCAAAAAGTTTTGTTGCTGAATGCAGAGCTTTGGCCAGAGTTCGTCATAGAAATCTTGTGAAAATCCTTACTTGTTGCTCAAGTGTTGACTACAAGGGTGTAGATTTCAAAGCATTGGTATTTGAATTCATGCCTAATGGAAGTTTGGAAAATTGGTTGCACAATCAAGAACTGTCTGAGTCCGAGAATCAAAATCTGAACCTCATACAAAGGTTAGATGTAGCAATTGATATTGCTCAAGCATTGGATTATCTTAACAATGATTTGGAGGAAGTAATTGTTCATTGTGACATAAAGCCCAacaacatttttcttgatGCCGACATGGTTGCTCACTTGGGAGACTTTGGGCTAGCTAGGCTCCTTCATGAGACTAAAGGCAATGCCAGTAGAGAGCAAGCCACATCCTCTACCGTAAAGGGAACCATTGGATATATTCCCCCAGGAAGGAAACCTACTGATAGCATGTTTAGTGAGAATCTAAGCCTTCACAAGACTTGTAAGATGGCATTGTCAGAAGGACTTATTGAACAAGTTGATCCACGTTTGCTTGTCCAATCTGATTATGCATATATGGATGCCTTGGTGTCCTTTGCTAGGATCGGAGTTGCCTGTTCTTCAGAATTTCCTTCTGAGCGGATGGGCATCAAAGATGTTATAGTGGAGTTGCTTGCAACTAAAAAGAGGTTGTCTTGTCCACAAGGTATCACAATTGTGCCCCAAAATTA 1313 0.3922 MKQLGKLYLQENFLSGGIPAKLGECSGLEELVMSGKLLNGSIPSSFGALKSLKLLELSRNNLSGTIPAELRNLSMLNNLNLSFNHLHGEIPFGGVFSNITALSLYGNEDLCGGIPQLKLPACPVIHLKKAKKRLHLKVILIIVVTGAFLCSVISIIILYMTKKPKRGFWLCLQRNSELFQQTYCCESTKSSNTGSSKSFVAECRALARVRHRNLVKILTCCSSVDYKGVDFKALVFEFMPNGSLENWLHNQELSESENQNLNLIQRLDVAIDIAQALDYLNNDLEEVIVHCDIKPNNIFLDADMVAHLGDFGLARLLHETKGNASREQATSSTVKGTIGYIPPGRKPTDSMFSENLSLHKTCKMALSEGLIEQVDPRLLVQSDYAYMDALVSFARIGVACSSEFPSERMGIKDVIVELLATKKRLSCPQGITIVPQN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00792 437 Gene3D Transferase(Phosphotransferase) domain 1 344 421 - -
Bva03g00792 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Bva03g00792 437 Pfam Protein tyrosine and serine/threonine kinase 191 328 IPR001245 GO:0004672|GO:0006468
Bva03g00792 437 Gene3D Ribonuclease Inhibitor 1 129 IPR032675 -
Bva03g00792 437 Pfam Leucine rich repeat 27 86 IPR001611 GO:0005515
Bva03g00792 437 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 191 343 - -
Bva03g00792 437 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 344 427 - -
Bva03g00792 437 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 166 - -
Bva03g00792 437 SUPERFAMILY Protein kinase-like (PK-like) 190 415 IPR011009 -
Bva03g00792 437 Gene3D Phosphorylase Kinase; domain 1 173 242 - -
Bva03g00792 437 ProSiteProfiles Protein kinase domain profile. 81 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00792 437 SMART serkin_6 137 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g00792 437 SUPERFAMILY L domain-like 2 111 - -
Bva03g00792 437 Gene3D Transferase(Phosphotransferase) domain 1 243 343 - -
Bva03g00792 437 PANTHER LRR RECEPTOR-LIKE KINASE 191 343 - -
Bva03g00792 437 PANTHER LRR RECEPTOR-LIKE KINASE 344 427 - -
Bva03g00792 437 PANTHER LRR RECEPTOR-LIKE KINASE 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00792 Bva-Chr3 4859268 4861014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00792 1 91 Receptor kinase-like Gene Family AT3G47570 42.857 1.07e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva03g00792 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00792 - - ccaj:109813865 421.779